Corylus avellana (European hazelnut): 132189368
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Entry
132189368 CDS
T09426
Name
(RefSeq) cryptochrome-1
KO
K12118
cryptochrome 1
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
132189368
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
132189368
NCBI-ProteinID:
XP_059460070
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Position
ca8:20183805..20189995
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AA seq
682 aa
AA seq
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MSSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVAVFVWAPEEEGHYYPGRVSRWWLKHS
LAHLDSSLRSLGTSLITKRSTDSVSSLLEVVKSTGATQLFFNHLYDPLSLVRDHRTKEVL
SAQGIAVRSFNADLLYEPWDVNDDHGRPFTTFAAFWERCLSMPYDPEAPLLPPKRIISGN
VSGCPSDALVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSAT
TSFLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNMAGEESVNLFLKSIGLREYSRYLSFN
HPQSHERPLLGHLKHFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVS
SFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFQGYKF
DPNGEYVRRWLPELARLPTEWIHHPWNAPEPVLQAAGIELGSNYPLPIVGIDAAKARLQE
ALSEMWQQEAASRAAIENGIEEGLGDSSESTPIAFPQDIQMAENHEPLRNNPPMTIRRYE
DQMVPSMTSLVRVEEEEPSSDIRNLVEESRAEVPMNLNGTEELAARTTLNQAFLQTVRSN
NLPQLNTSVVMRNAAEDSTAESSSSSRRERDGGVVPVWSPSTSSHSEQFVGDENGIASSS
SYLQRHPQSHQIVNWRRLSQTG
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggtggtggttgtagcatagtatggttcaggagagatctgagagtagaggat
aacccggcgctggctgccggagtaagagcaggcgcggtggttgccgtcttcgtctgggcg
ccggaggaggaaggccactactatcccggtagggtctcacggtggtggctcaagcacagt
ttggctcaccttgattcctccttgaggagcctcggcacttctctcatcaccaagagatcg
accgacagcgtttcttctcttcttgaggttgtcaagtcaaccggtgctactcagctcttc
ttcaaccacttatatgatcctttgtcgcttgttagggatcaccggacaaaggaggtttta
agtgcccaaggcatagctgtacgttcgtttaatgcagatttgctctacgaaccgtgggat
gttaatgatgatcacggccgcccattcacaactttcgccgccttctgggaaagatgcctt
agcatgccctatgaccctgaggctcccctcctcccacctaagaggataatttcaggtaat
gtatcagggtgtccatctgatgcattagtctttgaagatgaatcagagaagggaagcaat
gcacttcttgctcgggcatggtcacctgggtggagcaatgctgacaaggctctgactaca
ttcatcaatggaccattaatagagtattctaaaaatcgcaggaaagctgatagtgctaca
acctcatttctttctccccacctgcattttggagaggtgagtgtgagaaaagtatttcat
cttgttcgcatcaagcaggttctctgggccaatgaaggaaacatggctggtgaagagagt
gtcaacctgtttctcaagtctatcggccttagagaatattcaagatacttgagttttaac
catcctcagagtcacgaaaggcctcttcttgggcacctcaagcacttcccttgggtcgtg
aatgaaggctattttaaggcatggagacagggtagaactggttatccattggtggatgct
ggcatgagagagttatgggccactggctggctgcatgatcggatacgagtagttgtttct
agtttctttgtgaaggttctgcaacttccatggagatgggggatgaagtatttctgggat
acactcttagatgctgatcttgaaagtgatgctcttggttggcagtatatatctggtact
cttcctgacggccgtgaatttgaccgcatagataatccacagtttcagggctacaagttc
gaccccaatggagaatatgtacgacgttggcttcctgaacttgccaggctaccaactgaa
tggatacaccacccatggaatgcaccagaacctgtactccaagctgcaggaattgagctg
gggtcaaactatcctcttccgattgtagggatagatgcagcgaaagccaggctgcaagaa
gcactatcagagatgtggcagcaagaagcagcttcaagagctgcaattgaaaatggaatc
gaggaggggcttggagactcctctgaatcaaccccaattgcctttcctcaagatatacaa
atggcggaaaatcatgaaccattgaggaacaacccccctatgacaattcgtcgctatgag
gatcagatggtaccaagcatgacttctttggtgagagtggaagaggaagaaccttcttcg
gacattcgaaatttggtagaagagagcagagctgaagtgccaatgaatctgaatggaact
gaagaattagcagcaaggaccacattaaaccaagcttttcttcagaccgttcgcagcaac
aatctgccacaacttaatacttcagtagtgatgcggaatgctgctgaagattccacagca
gaatcctctagtagtagtaggagagagagggatggaggtgtagttcccgtttggtctcct
tcgacttctagtcactctgaacagtttgtgggtgatgaaaatggcattgcttctagttca
tcatacttgcagaggcatcctcagtcccaccaaatagttaattggaggcggctatctcaa
accgggtag
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