Corylus avellana (European hazelnut): 132189477
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Entry
132189477 CDS
T09426
Name
(RefSeq) DNA mismatch repair protein MLH1-like
KO
K08734
DNA mismatch repair protein MLH1
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03430
Mismatch repair
cave03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
132189477
03460 Fanconi anemia pathway
132189477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cave03400
]
132189477
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
132189477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
Motif
Other DBs
NCBI-GeneID:
132189477
NCBI-ProteinID:
XP_059460206
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Position
ca8:complement(1133562..1143611)
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AA seq
474 aa
AA seq
DB search
MLELSLILLSFSLSPLYSDRLVECTALKRAIEIVYAATLPKASKPFVYISVVLPPEHVDV
NVHPTKREVSLLNQEVIIEKIQSVVESKLRNSNEARTFQEQKVEPSPYDKMALDKDSTFR
SSQSGSKSQKVPVHKMVRTDSSDPAGRLHAYLQPKPRGPLEKNPSLDAVRSSVRQRRNPK
ETADITSVQELIEEIDCNYHSGLLDVLRHCTYIGMADDVFALLQHDTHLYLANVVNLSKE
LMYQQVLRRFSHFNAIQLSEPAPLSELLMLALKEENLDPEGQENNDLIEKIAEMNTELLK
QKMEMLEEYFCIHIDKHGNLSRLPVVLDQYTPDIDRLPEFVLCLGNDVDWEDEKNCFQSV
SAALGNFYAMHPPMLPNPSGDGLQFYKKREPLRNLEDEEKASDDIGDDNLMENEIEHELL
SEAETAWAQREWSIQHVLFPSIRLFFKPPTSMASNGTFVRVASLEKLYKIFERC
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgttagaactctcacttattcttttatctttttccctctcccctctttattcagataga
ttggtagaatgcactgctttgaagagagctattgaaattgtttatgctgcaaccttgccc
aaagcatcaaaacccttcgtatatatatctgttgtattgccacctgaacatgttgatgtc
aatgtgcacccaacaaagagagaggtaagccttttaaatcaggaagttattattgagaag
atacagtcagtggttgaatcaaaattgagaaactccaatgaggcacggacatttcaggaa
cagaaagtagaaccatctccatatgataaaatggctctggataaggattctactttccgc
tcctcacaatctggatcaaaatcacaaaaagttccggtgcataaaatggttagaacagat
tcatccgatcctgctggaaggttacatgcctacttgcaacctaagcctcgtggaccactt
gaaaagaatcctagtttggatgctgtgaggtcctctgttagacaaagaaggaacccaaag
gagactgcagatattacaagtgttcaggagcttattgaagaaatcgattgcaattatcat
tccggtctgctggatgttctaagacactgcacatatattggaatggcagatgatgtcttt
gcattgcttcagcatgacactcatctctatcttgcaaatgtggtgaacttgagcaaagag
ctcatgtaccagcaagttctgcgccggttttcccattttaatgctatacaattaagtgag
ccggctccactgtctgagttgcttatgttggcattgaaagaagaaaatttagatccagaa
ggccaggagaataatgacctaatagaaaaaattgcagaaatgaataccgagttactcaag
caaaagatggaaatgttagaggagtatttctgcattcatattgataaacatgggaatttg
tctagacttccagtggtacttgaccagtacactcctgacattgatcgcctcccggaattc
gtcctttgtttgggcaatgatgttgactgggaggatgaaaaaaattgcttccaatcagtt
tcagctgctcttggaaacttctatgctatgcatcctcctatgttacccaatccatcaggt
gatggtttgcagttctacaaaaagagagaacctctcaggaatcttgaagatgaagaaaaa
gcctctgatgacataggggatgacaacctaatggagaatgagatcgagcacgaactactt
tcggaggcagagactgcatgggcccagcgtgaatggtcaatccagcacgtcttgtttcca
tccatcagactctttttcaagccacctacttctatggcttcaaatggaacctttgtccgg
gtagcgtcattagagaagctttacaagatctttgaaagatgctaa
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