Corylus avellana (European hazelnut): 132189478
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Entry
132189478 CDS
T09426
Name
(RefSeq) DNA mismatch repair protein MLH1-like
KO
K08734
DNA mismatch repair protein MLH1
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03430
Mismatch repair
cave03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
132189478
03460 Fanconi anemia pathway
132189478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cave03400
]
132189478
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
132189478
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
YchJ_N
Motif
Other DBs
NCBI-GeneID:
132189478
NCBI-ProteinID:
XP_059460207
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Position
ca8:1151214..1165009
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AA seq
671 aa
AA seq
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METHCGDCDSEPLAMENEEEPRRKEPPRIHRLDESVVNRIAAGEVIQRPVSAVKELVENS
IDAHSTSISVVVKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSTFEDLQSIKSMGF
RGEALASMTYVGHVTATTITKGQLHGYRVSYRDGVMEHEPKACAAVKGTQIMVENLFYNM
IARRKTLQNSADDYSKIVDLLSRFAVHHIHVGFSCRKHGASRADVHTVATSSRLDAIRSV
YGVSVARSLIKIENSDNNPSSSVFKMDGFISDSNYVAKKITMVLFINDRLVECTALKRAI
EIVYAATLPKASKPFVYISVVLPPEHVDVNVHPTKREVSLLNQEVIIEKIQSVVESKLRN
SNEARTFQEQKVEPSPYDKIALDKDSTFSPSQSGSKSQKVPVRKMVRTDSSDPAGRLHAY
LQAKPRGPLQKNPSLDAVSKELMYQQVLRRFSHFNAIQLSEPAPLSELLMLALKEENLDP
EGHENNDQIEKITELLKQKMEMLEEYFCIHIDKHGNLSRLPVVLDQYTPDIDRLPEFTLC
LGNDVDWEDEKNCFQSVSAALGNFYAMHPPMLPNPSGDGLQFYKKRKPLRNLEDEEKASD
DIGDDDLMENEIEHELLSEAESAWAQREWSIQHVLFPSIRLFFKPPTSMASNGTLVRVAS
LEKLYKIFERC
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccattgtggcgattgcgactctgagcctctcgcgatggaaaacgaagaagag
ccacggcgaaaagagcctcccagaatccaccgcctggacgagtcagtggtcaaccgcatc
gcggccggggaggtgatccaacggccagtatccgccgtcaaggagctggtggagaacagc
atcgacgcccattccacctccataagcgtcgtcgtcaaggacggcggccttaaactcatt
caagtctctgacgacggccacggcatccgatacgaggacttgccaatcctatgcgaaagg
cacacgacgtcaaagctgtcaacttttgaggatttacaatcgataaagtcaatggggttc
agaggagaggctttggcaagcatgacctacgttggtcatgttacggccacaaccatcacc
aaagggcagttacatggttacagagtatcttatagagacggtgtcatggagcatgaaccg
aaagcatgtgctgccgtaaaaggaactcagataatggttgagaatctattctataacatg
attgctcggaggaagacgcttcaaaattctgctgatgattattcaaagattgtagacttg
ctaagccggtttgctgttcatcacatacatgtgggattctcctgccgaaagcatggagct
tccagagcagatgtccacacagttgctacatcatcaaggcttgatgctattcgatcagtt
tatggggtgtcagttgctcgatctcttataaaaatagaaaattccgacaataatccatct
agttcagttttcaagatggatggtttcatctcagattcaaattatgttgcaaagaagata
acaatggtactttttatcaatgatagattggtagaatgcactgctttgaagagagctatt
gaaattgtttatgctgcaaccttgcccaaagcatcaaaacccttcgtatatatatctgtt
gtattgccacctgaacatgttgatgtcaatgtgcacccaacaaagagagaggtaagcctt
ttaaatcaggaagttattattgagaagatacagtcagtggttgaatcaaaattgagaaac
tccaatgaggcacggacatttcaggaacagaaagtagaaccatctccatatgataaaatt
gctctggataaggattctactttcagcccctcacaatctggatcaaaatcacaaaaagtt
ccggtgcgtaaaatggttagaacagattcatctgatcctgctggaaggttacatgcctac
ttgcaagctaagcctcgtggaccacttcaaaagaatcctagtttggatgctgtgagcaaa
gagctcatgtaccagcaagttctgcgccggttttcccattttaatgctatacaattaagt
gagccggctccactgtctgagttgcttatgttggcattgaaagaagaaaatttagatcca
gaaggccatgagaataatgaccaaatagaaaaaattacagaattgctcaagcaaaagatg
gaaatgttagaggagtatttctgcattcatattgataaacatgggaatttgtctagactt
ccagtggtacttgaccagtacactcctgacattgatcgcctcccggaattcaccctttgt
ttgggcaatgatgttgactgggaggatgaaaaaaattgcttccaatcagtttcagctgct
cttggaaacttctatgctatgcatcctcctatgttacccaatccatcaggtgatggtttg
cagttctacaaaaagagaaaacctctcaggaatcttgaagatgaagaaaaagcctctgat
gacataggggatgacgacctaatggagaatgagatcgagcacgaactactttcggaggca
gagagtgcatgggcccagcgtgaatggtcaatccagcacgtcttgtttccatccatcaga
ctctttttcaagccacctacttctatggcttcaaatggaacccttgtccgggtagcttca
ttagagaagctttacaagatctttgaaagatgctaa
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