Corylus avellana (European hazelnut): 132189554
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Entry
132189554 CDS
T09426
Name
(RefSeq) uncharacterized protein LOC132189554
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cave03016
]
132189554
Enzymes [BR:
cave01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
132189554
Transfer RNA biogenesis [BR:
cave03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
132189554
Prokaryotic type
132189554
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
132189554
NCBI-ProteinID:
XP_059460278
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All DBs
Position
ca8:complement(24294677..24297021)
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AA seq
513 aa
AA seq
DB search
MKMESPDIKTTRSPPPPQEPEPEPKKLKMSTTTTTSDDEDPSAATTGPGTVKKQRYKRRK
IAILFAYCGVGYQGMQKNPGAKTIESDLEEALYLSGAVPEQDRNNSKRYDWARSARTDKG
VSAVGQVVSGRFYIDPPGFVERLNSNLSSQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPV
FALDPSSHRDRESVLASLGSGNALVKCLECSERGRKVVGLMGKRNFEFKAVSSDSGISSN
SGDALQESNVKEENTVYLENAGNEKLMSESMEEPKVVDDNRPSEIAVDTVVAAPNEVTDE
KVNGEEVAKGSGFCYGEKEKERFNRILKHYVGTHNFHNFTTRTKAEDPAAHRFIVSFEAN
TTVTVDGIEFVKCEVIGQSFMLHQIRKMIGVAVAIMRNCTPEALIEKALQKDVNINVPTA
PEVGLYLDECFFTSYNKKWKDSHEEVSIKAYEEEAEEFKMKQIYSHIASTEHKEGAVALW
LHSLNHRNYPDLRVASDEDPNNEKSDEMKNMAE
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggaaagcccagatatcaaaaccacaagatctccaccaccgcctcaagaaccc
gaacccgaacctaagaagctcaaaatgtcaaccaccaccaccacctcggacgacgaggac
cccagcgccgccacgaccggacccggaaccgtcaaaaagcaaaggtacaagcgccgcaaa
atcgcgatcctcttcgcgtattgcggcgttggctaccaaggcatgcaaaagaacccaggt
gccaaaacaatcgaatccgacctcgaagaagcgctttacctctccggtgcggtgcccgag
caggaccgcaacaactccaagcgctacgattgggctcgctcagcccggaccgacaagggg
gtcagcgccgtgggccaggtcgtctcgggccggttctacatcgacccgccgggcttcgtc
gagcggctaaactcgaatctctcctctcaaatccggatcttcgggtacaagcgcgttacg
gggtcgtttaacgccaagaagttctgcgatcggaggaggtacgtgtatctaatacccgtg
tttgcgcttgatccctcttcgcatcgcgatagagagagcgttttggctagtttggggtct
ggaaatgcactcgttaagtgcttggaatgctccgagagaggccgtaaggttgtaggttta
atgggtaagcgtaatttcgaatttaaagctgtgagttccgattcaggcatttcgtcgaac
agtggggatgctctgcaggaatctaacgtcaaagaggaaaacacggtttatttggaaaat
gccggcaatgagaagttaatgtctgaatctatggaggaacctaaggttgtagatgacaac
agaccttctgaaattgcggttgacactgtagttgctgccccaaacgaggttactgatgag
aaagtaaatggagaggaggttgcaaagggaagtgggttttgttatggtgagaaggagaag
gagaggtttaataggatcttgaagcactatgtggggactcataacttccataacttcacc
accagaacaaaagccgaggaccctgctgctcatcgcttcattgtttcgttcgaagcaaac
accacagtgacggttgatggtattgagtttgtcaagtgtgaagttatcgggcaaagcttc
atgcttcatcagattcgaaaaatgattggggttgctgtggctatcatgaggaattgtact
ccagaggcattgatagaaaaagctttgcaaaaggatgttaacattaatgtgccaacggct
cctgaggttggtttgtacttggatgagtgcttctttacatcatataacaagaaatggaaa
gacagccatgaagaggtgtcaatcaaagcatatgaagaagaggcagaggagttcaaaatg
aagcaaatatactctcacattgcctcaacggagcataaagaaggagccgtggccctctgg
ttgcattctctgaaccaccgtaattatccagatttacgcgttgccagtgatgaggaccca
aataatgagaaaagtgatgaaatgaagaacatggctgagtaa
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