Corylus avellana (European hazelnut): 132189806
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Entry
132189806 CDS
T09426
Name
(RefSeq) probable rhamnogalacturonate lyase C
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
132189806
Enzymes [BR:
cave01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
132189806
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
132189806
NCBI-ProteinID:
XP_059460584
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Position
ca8:complement(22215549..22226419)
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AA seq
834 aa
AA seq
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MSLGVQLHVGDSHVIMDNGILQVTLSNPDGIVTGVKYNGIDNLLEVLNEEVNRGYWDLVW
SEAGSTGTTGIFDVIKGTSFKVVVESEEQVEISFARLWDPSLQGKLVPLNIDKRFIMLRN
SPGFYSYAIYDHLREWPPFNLPQTRIVFKLRKDMFHYMAVADNRQRYMPLPDDRLPERGK
ALATPEAVLLVNPVEPEFKGEVIMDNGILQVTLSNPDGIVTGVKYNGIDNLLEVLNEEVN
RGYWDLVWSEAGSTGTTGIFDVIKGTSFKVVVESEEQVEISFARLWDPSLQGKLVPLNID
KRFIMLRNSPGFYSYAIYDHLREWPPFNLPQTRIVFKLRKDMFHYMAVADNRQRYMPLPD
DRLPERSKALATPEAVLLVNPVEPEFKGEVDDKYQYSCEDKDLGVHGWISIDPPVGFWEI
TPSDEFRSGGPIKQNLTSHVGPINLAMFLSAHYGGEDLVLKLKPDEPWKKVFGPIFIYLN
SVSGEEDPLWLWEDAKNQMRIEVENWPYNFPASEDFPSSDQRGRVRGRLQIRDRYLSDEC
ISANSAHVGLAPPGDVGSWQTECKGYQFWTRTDADGYFSINNIQSSDYNLYAWVPGVVGD
YQYEVVITIIAGSDIDVGDLVFEPPRDGPTLWEIGIPDRSAAEFYIPDPDPKYINKLFVN
HPDRYRQYGLWERYADLYPNGDLVYTVGVSDYHKDWFFAQVTRKINEDTYQATTWQIKFK
LYQVDTTGAYKLRLALATAHVSELQVRVNDPEADPPIFSTGVIGHDNTIARHGIHGLYRL
YNVEVAGNLLVDDGDNTIFLTQTQSTGPLQGIMYDYIRFEGPPSSSNSIKEVYI
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaggggtgcaactgcacgttggggacagtcatgtgataatggataatggcata
ctacaagtaacattatcaaatccagatgggattgttacgggagtaaaatataatggcatc
gacaatttgcttgaagttcttaatgaagaggttaacagagggtattgggaccttgtatgg
agtgaagctggaagtacaggaacaacgggtatattcgatgtgattaaagggacaagtttt
aaggttgtagtggaaagtgaggaacaagtagagatctcattcgcaaggctgtgggatccc
tcgcttcaggggaagctcgtgcccttaaatatagacaaaaggtttataatgctacgtaat
tccccgggcttctattcctacgccatctacgaccacttaagggaatggcctcctttcaac
ctcccacagactaggattgttttcaaactcagaaaagacatgtttcactacatggcagtg
gcggacaacaggcaaagatacatgcctcttccagatgaccggttgccagaaagaggcaaa
gctctagccaccccagaagcagttttgcttgttaatcctgtagagccagagttcaagggg
gaggtgataatggataatggcatactacaagtaacattatcaaatccagatgggattgtt
acgggagtaaaatataatggcatcgacaatttgcttgaagttcttaatgaagaggttaac
agagggtattgggaccttgtatggagtgaagctggaagtacaggaacaacgggtatattc
gatgtgattaaagggacaagttttaaggttgtagtggaaagtgaggaacaagtagagatc
tcattcgcaaggctgtgggatccctcgcttcaggggaagctcgtgcccttaaatatagac
aaaaggtttataatgctacgtaattccccgggcttctattcctacgccatctacgaccac
ttaagggaatggcctcctttcaacctcccacagactaggattgttttcaaactcagaaaa
gacatgtttcactacatggcagtggcggacaacaggcaaagatacatgcctcttccagat
gaccggttgccagaaagaagcaaagctctagccaccccagaagcagttttgcttgttaat
cctgtagagccagagttcaagggggaggtggatgacaagtatcagtactcatgtgaggac
aaagatctcggggtccacggatggatctccatcgacccacctgtggggttttgggaaatc
acacctagcgatgagtttagatcgggtggacccattaaacagaaccttacttcccatgtg
gggcccattaacctcgcaatgtttctcagtgctcactatggaggagaggatcttgtattg
aaactgaaaccagatgaaccatggaagaaagtctttggccctatctttatctatcttaat
tctgtatcgggtgaagaagacccactttggctttgggaggatgctaaaaatcaaatgagg
attgaagttgaaaactggccctacaattttccggcttctgaggattttccatcgtctgat
caaaggggcagggttcgtggtagattacaaatccgagacaggtatttaagtgatgagtgc
atttctgcaaactcagctcatgtgggcttggcaccacctggagacgttggatcctggcaa
acagaatgcaagggttatcaattttggacaagaacagacgcagatggttatttcagcatc
aacaatatacaaagcagtgattataatctttatgcatgggttcctggtgttgttggtgat
taccagtacgaggttgtaattaccataattgcaggtagtgatattgatgtgggtgatctt
gtatttgagcctccaagagatggcccgactctatgggaaataggcatcccagatcgctct
gctgctgaattttacattcccgatcctgatccaaagtatattaacaaactttttgtgaat
catcctgacagatataggcaatatggattgtgggaaagatacgcagatttatacccgaat
ggagatttggtttacacggtcggtgttagcgactatcacaaagattggttctttgctcag
gttaccaggaaaataaatgaggacacatatcaagcaaccacgtggcaaatcaagttcaaa
ctctaccaagtggatacaaccggagcctataaactgcgattggcacttgcaacagctcac
gtctctgaattacaggttcgggtaaacgatccagaagcagatccgccgatattttcaacc
ggagtaattggacacgacaacacaattgctagacatggaatccatggactctaccggctg
tacaacgttgaagtagccggcaatttgcttgtggatgatggggataataccattttcctg
acacagacacaaagcaccggccctctccaggggatcatgtatgactacattcgctttgaa
ggcccaccgtcctcatcaaattccattaaagaagtctatatttaa
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