Corylus avellana (European hazelnut): 132189834
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Entry
132189834 CDS
T09426
Name
(RefSeq) replication protein A 32 kDa subunit A isoform X1
KO
K10739
replication factor A2
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03030
DNA replication
cave03420
Nucleotide excision repair
cave03430
Mismatch repair
cave03440
Homologous recombination
cave03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132189834
03420 Nucleotide excision repair
132189834
03430 Mismatch repair
132189834
03440 Homologous recombination
132189834
03460 Fanconi anemia pathway
132189834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cave03032
]
132189834
03400 DNA repair and recombination proteins [BR:
cave03400
]
132189834
DNA replication proteins [BR:
cave03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
132189834
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
132189834
MMR (mismatch excision repair)
132189834
DSBR (double strand breaks repair)
HR (homologous recombination)
132189834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
HTH_24
RMI2
HTH_5
DUF7770
HTH_27
Motif
Other DBs
NCBI-GeneID:
132189834
NCBI-ProteinID:
XP_059460623
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Position
ca8:complement(7197086..7214560)
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AA seq
281 aa
AA seq
DB search
MFSSSQFESNSAFSGGGFTFSHQSQPSDSDPSPAKSRETQGLVPVTVKQISEASQSGDEK
STFVINGVDVANVTLVGMVFDKLGRNTDVGFNLDDGTGRIGCRRWINENFDTIEMEKILD
GMYVRVNGHLKSFKGVKQVVAFSVRPVTNFDEVAFHFIDCIHNHLQSKSQLQGVTPIQPQ
SVDMSFNTPVKNESTGYQTAPSTQLSGQFSSDGLKSCDQLVLDYLQQPSSIGQEKGIHRD
ELSQHLKLPVDKIMYSIRALEEEGLIYSTIDEFHYKSTACG
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgttctcaagctcccagttcgaatccaactccgccttctccggtggcggatttacgttc
tctcatcaatctcagccctccgattcagatccctctccggcgaaaagtcgtgaaactcag
ggtttggttccagtgacagtgaagcaaataagcgaggcttctcaatctggtgatgaaaag
tcgacttttgtgatcaacggtgtggatgtggccaatgtgacgctggttgggatggtgttt
gataaacttggaaggaatactgatgttggtttcaacctagatgatggaacaggaagaatt
ggatgtagaagatggatcaatgagaattttgacacaatagaaatggagaaaatactagat
ggaatgtatgttcgtgttaatggacacctgaagagctttaaaggtgtcaagcaagtagtt
gccttctctgtcaggcctgtgacaaacttcgatgaggttgccttccattttatcgattgc
atacataaccacttgcaatccaagtcacagttgcaaggagttaccccgatccagcctcag
tcagtggatatgtcctttaacactcctgtgaagaatgaatcaactggatatcagacagcc
ccatctactcaattatctggccaatttagcagtgatgggctcaagagctgtgatcaattg
gtcctcgactatctgcagcagccttcaagcattggacaggagaaggggatacacagggat
gaactttcacagcacctaaaacttcctgtggataagataatgtactccattagggctctt
gaggaggagggtttgatatactctaccattgatgagtttcactacaagtcaactgcatgt
ggttga
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