Corylus avellana (European hazelnut): 132189919
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Entry
132189919 CDS
T09426
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
132189919
Enzymes [BR:
cave01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
132189919
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
132189919
NCBI-ProteinID:
XP_059460743
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Position
ca8:complement(22265457..22271280)
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AA seq
653 aa
AA seq
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MSPLGVHLHVEDRHVVMDNGILQVTLSNPEGIVTGIRYGAVDNLLEVNNDESNRGYWDLV
WNTPGTTGIFDVIKGTSLKVIVENEEQVELSFTRSWDPSMEGKVVPLNIDKRFILLRGSS
GFYSYAIYEHLQDWPAFNLGETRIAFKLRKDKFHYMAMADNRQRYMPLPDDRLPTRGQAL
AYPEAVLLVNPVEPELKGEVDDKYQYSNDNQNIRVHGWISTDPPVGFWQITPSNEFRSGG
PCKQNLTSHVGPTTLAMFLSAHYSGDDLVPKFGAGEQWKKVFGPVFMYVNSVYDGESEDP
LVQLWEDAKIQMLIEVQSWPYSFPASEDFPKSDQRGNVSGRLLVRDRYVSDDYISANGAY
VGLAPPGDVGSWQRECKDYQFWSKAEEDGYFSINDIRTGDYNLYAWIPGFIGDYKYDVII
SITEGYDIEVGDLVYEPPRDGPTLWEIGIPDRSAAEFYVPDPNPKYINKLFVNHPDRFRQ
YGLWERYAELYPDNDLVYTVGVSDYTKDWFYAQVTRKKKDSNTYQGTTWQIKFKLDNVDS
NATYKLRVAIASATLSELQVRVNDPKANPPLFSSGSIGRDNSIARHGIHGLYWLFNVNVP
GARLVEGDNIVFLTQPRSSSPFQGIMYDYLRLEGPPSSGSQLPTKKTIINYNV
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccattgggggtgcatttacatgttgaagatcgtcatgtggtaatggacaatggc
attctacaagtgactttatcgaatccagagggaattgttacaggaattcgatacggtgcc
gttgacaacttgcttgaagttaataacgacgaatctaatagagggtactgggaccttgtt
tggaacacaccaggaactactggtatatttgatgtaatcaaaggaacaagtttaaaggtt
atagttgaaaatgaagaacaggttgagctctctttcacaagaagctgggatccttcgatg
gagggcaaggttgtcccattaaatattgacaaaaggtttatattgctccgtggttcgtct
ggattttactcttacgctatttacgagcacctccaggactggcctgcattcaacctcggt
gaaaccaggattgccttcaagctcagaaaagacaagtttcactatatggctatggcggac
aacaggcaaagatacatgcccctcccggatgacagattgcctacaagaggccaagccctg
gcctacccagaggcagtcctacttgtgaacccagtggagccagagttaaaaggagaggtg
gatgacaagtaccaatactcgaatgacaaccaaaacattcgggtacacgggtggatctct
accgacccacccgtcggattctggcaaatcacacctagcaacgagttccgatctggtggt
ccctgcaaacagaacctaacatcacatgtgggccccaccacccttgctatgttccttagt
gcacattattccggagacgatctggtcccgaaattcggagctggtgagcaatggaaaaaa
gttttcggcccggtttttatgtacgttaattctgtatatgatggagagtcagaagaccca
ctagttcagctttgggaggatgccaaaatacagatgctgattgaagtccaaagctggccc
tatagcttccctgcgtcggaggattttcccaagtcagaccaacggggtaacgttagtggt
aggcttctagtccgagacaggtatgttagcgatgactatatatccgcaaatggtgcttat
gttggcttggcgcctcctggagacgttggatcatggcaaagagaatgcaaggactaccaa
ttttggagcaaagcagaggaggatgggtatttttccattaatgatatacgtactggggat
tataatctttatgcatggatcccaggttttatcggggactacaaatatgatgttattatt
agcataaccgaaggttatgatattgaagtaggtgatcttgtttatgagcctccaagagat
ggccccacgctgtgggaaataggcattcctgatcgttcagccgctgagttttatgtccct
gatccaaatccaaagtatatcaataaactcttcgtcaatcatcctgacaggtttaggcag
tatggcttgtgggaaagatacgcagaactgtatcctgataacgacttggtttacacagtt
ggcgttagcgactacactaaagattggttttatgctcaggttaccaggaagaaaaaagac
agtaatacatatcaaggaacaacatggcaaatcaaatttaagctggacaatgtggatagt
aatgctacttataaactgcgagtggcaattgcatctgccactctttctgaattgcaggtt
cgggtcaacgacccaaaagcaaatcctcccctattttcaagcggatcgatagggagggat
aactccattgccagacatggaatccacgggctctattggcttttcaacgtgaacgtgcct
ggcgctcgtcttgtcgaaggggataatatcgtctttttgacacaaccaagaagctcaagc
cctttccaagggattatgtatgattatctccgtttagaaggtccaccatcttctggttcc
caacttcccacaaagaaaacaataattaattacaatgtttaa
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