Corylus avellana (European hazelnut): 132190078
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Entry
132190078 CDS
T09426
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132190078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132190078
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132190078
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
132190078
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
132190078
NCBI-ProteinID:
XP_059460940
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Position
ca8:2663407..2664995
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AA seq
274 aa
AA seq
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MSILPKGDSIQIREVWSDNLEEEFALIREIVDAYKYIAMDTEFPGVVLRPVGTFKNINDY
NYQTLKDNVDMLKLIQLGLTFSDEHGNLPTCGTDKFCIWQFNFREFNVSEDIFASDSIEL
LRQCGIDFKKNNEEGIDVNRFGELLMSSGIVLNDGVQWVTFHSGYDFGYLLKLLTCRSLP
DTQAGFFDLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTA
STFRKLRETFFSGSTEKYAGVLYGLGVENGQSTN
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattttaccgaaaggcgattcgattcaaatccgtgaggtttggagcgataatttg
gaagaagaatttgctttgatccgtgaaattgttgacgcgtataagtatattgctatggac
accgagttccccggcgtggttcttcgccccgtggggacgttcaagaatataaatgactat
aactatcaaaccctgaaagacaatgtcgatatgttgaagttgatccaattgggtctcaca
ttttctgatgagcatgggaatctgcccacctgcgggaccgataagttctgcatctggcaa
ttcaatttccgcgagtttaatgtaagcgaggatattttcgctagcgattcgattgagttg
ttgcgccagtgtgggattgatttcaagaagaataatgaggagggcattgatgtgaatcgc
ttcggtgagctcttgatgtcgtccgggattgtgttgaatgatggtgtgcaatgggttacc
ttccatagtgggtatgatttcgggtacttgcttaagctgttgacatgccggagtttgccc
gatacacaggcggggttctttgatttgatcaatatgtatttccccacggtgtacgatatc
aagcatttgatgaagttttgcaatagccttcatggagggttgaacaagctcgcagagttg
ttggaagtggagagagttggtgtttgtcatcaagcgggttctgatagtttgctgacggct
tctacgtttaggaagttgagggagaccttcttcagcggctctacggagaagtatgcgggt
gttctatatggtctcggtgtcgagaatggacagagtactaattga
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