Corylus avellana (European hazelnut): 132190143
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Entry
132190143 CDS
T09426
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132190143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132190143
03036 Chromosome and associated proteins [BR:
cave03036
]
132190143
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132190143
Coactivators
SAGA/TFTC/STAGA complex
132190143
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
132190143
STAGA complex
132190143
TFTC complex
132190143
SAGA complex
132190143
SLIK complex
132190143
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_IFT122_1st
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_EML
DSE1_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_IFT140_1st
ASA1
Beta-prop_WDR75_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
PAC11
Beta-prop_VPS8
Beta-prop_WDR41
CFAP251_N
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
Beta-prop_EIPR1
Beta-prop_DCAF4
Ge1_WD40
Beta-prop_Vps41
Beta-prop_SPT8
Tricorn_2nd
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Dimer_MINDY4_N
LisH_SSDP
LisH
SHKBP1_KCTD3_C
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
132190143
NCBI-ProteinID:
XP_059461025
LinkDB
All DBs
Position
ca8
Genome browser
AA seq
693 aa
AA seq
DB search
MEEDQIEKFVAEYLKKKGFKQAEHAFQEERQHQQSKNTSSSSITTNSLSDPDLAKHILAF
SELENGPARYHDGYSKFRSWTYSSLDLYKHELLRVLYPVFIHCFMDLVEKGHVQEARTFF
NSFREDHEMMHSRDLQKLEGVLSPSHLGEMEFAHSLRQNKVKIKICQYSYDLLLEYLHKT
KLTTMLGVINEHINFQVSPGQPSSISDDTEVVTLTGSSQDEATQINQKEIHWGLLEDSLE
ERLEKGGGLLSDSEKAEGETKEGELDENKKRSGEGAKQGMSIKKVKKDKGASATGKAGRP
EANTVPMAPRVKPELTLPVVHTDVEKSILEDLRNRVQLSSVSLPSVSFYTFINTHNGLNC
SSISHDGSLVAGGFSDSSLKIWDMAKLGQEPVGPVLQGENGTTSSEHVLGSRGGKRYTLF
QGHSGPVYSATFSPLGDFLLSSSADSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHY
FASSSHDRTARIWSMDRILPLRIMAGHLSDVDCVQWHVNCNYIATGSSDKTVRLWDVQSG
ECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTGRFITPLIGHTSCVWTLAF
SGEGSLLASGSADCTVKLWDVASSTKVPKTEEKWKYQQTKIIENSSNQVHTCLCIAVFSK
ESSICSWGSLKKRIGCPLSTQHYIDFGLLALRT
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaccaaatagagaagtttgtggcagagtacctgaagaagaaggggttcaag
caagctgagcacgctttccaagaagaacgacaacatcaacagagcaagaacacttcatcg
tcctccatcaccaccaattccctctctgaccctgacctcgccaagcacatcctcgccttc
tccgaattggagaatggtccggcacgataccatgatggatatagcaagtttaggtcatgg
acttatagttcactagatttgtacaagcatgagttgcttcgcgtgctttatcctgtattt
attcattgtttcatggatctggtggaaaaagggcatgttcaagaagcacgaacctttttc
aatagcttccgtgaagaccatgaaatgatgcactcgcgagaccttcaaaagttggaagga
gttctttctccctctcatctgggggagatggaatttgctcattctcttaggcagaacaaa
gtaaaaataaagatatgtcagtactcctatgacctactgctggagtatctacacaagaca
aaattgaccacaatgcttggggttataaatgagcatattaactttcaagtttctccaggg
cagcctagctcaatttctgatgatactgaagtcgtaacacttactggaagcagccaggat
gaggccacgcagataaatcagaaggaaatacattgggggctgcttgaagattctttagaa
gaacgcttggaaaagggtggaggtttgctctcagattctgaaaaggccgaaggagaaacc
aaagagggagaattagatgagaataagaaaagatcaggtgaaggagcaaagcaaggcatg
tcaattaaaaaggtcaagaaggacaagggtgcaagtgcaacagggaaagctgggcgtcct
gaggctaacactgtacctatggcaccacgagtcaaaccagagcttaccttgccagtagtt
cacacagacgtagaaaagtctattcttgaagacctaagaaaccgtgtacagttgagtagt
gtctcactgccatctgtcagcttttatacattcatcaacacacataatggtttaaactgt
tcatcaatatcccatgatggatctttggttgctggaggattttcagactcatctttgaag
atttgggacatggcaaagcttgggcaagaacctgttggccctgttttgcagggtgaaaac
ggtaccacttcaagtgaacatgttttagggtcaagaggtggaaaaagatatacattgttt
cagggtcattcagggccagtgtattctgccacttttagtccgctaggagattttttactt
tcctcttcagcagactcaacaattcggttatggagcacaaaactaaacgcaaatcttgtc
tgctacaaggggcacaattacccagtgtgggatgttcagtttagtcctgtaggacattat
tttgccagctcttcacacgatcgaacagcaaggatttggtctatggacagaatactgcct
ttaaggataatggcagggcacttatctgatgttgattgtgtgcagtggcatgttaactgc
aactacattgccactggctctagtgataaaacagtccgattgtgggatgtacaaagtggg
gagtgcgtccgaattttcattggtcacaggagtatggttttgtctttggcaatgtcgcct
gatgggcggtatatggcctctggtgatgaagatggcacaatcatgatgtgggatctctcg
actggtcggtttattacacctttgatcggtcacacctcatgtgtatggacccttgctttc
agtggtgaaggttctctacttgcatctggatctgctgattgcactgtaaaattatgggac
gtagcttcgagtacaaaggtgccaaagaccgaagaaaagtggaaataccaacagactaag
atcattgaaaactcttccaaccaagtccacacctgtctatgcattgcggttttctcgaag
gaatcttctatttgcagctggggctctctcaaaaagcgtatagggtgccctctctccact
cagcattatattgattttggtcttttagctctcaggacttaa
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