Corylus avellana (European hazelnut): 132190143
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Entry
132190143 CDS
T09426
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132190143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132190143
03036 Chromosome and associated proteins [BR:
cave03036
]
132190143
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132190143
Coactivators
SAGA/TFTC/STAGA complex
132190143
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
132190143
STAGA complex
132190143
TFTC complex
132190143
SAGA complex
132190143
SLIK complex
132190143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
Ge1_WD40
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
WD40_like
LisH
Beta-prop_VPS8
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
132190143
NCBI-ProteinID:
XP_059461025
LinkDB
All DBs
Position
ca8:2512107..2528153
Genome browser
AA seq
693 aa
AA seq
DB search
MEEDQIEKFVAEYLKKKGFKQAEHAFQEERQHQQSKNTSSSSITTNSLSDPDLAKHILAF
SELENGPARYHDGYSKFRSWTYSSLDLYKHELLRVLYPVFIHCFMDLVEKGHVQEARTFF
NSFREDHEMMHSRDLQKLEGVLSPSHLGEMEFAHSLRQNKVKIKICQYSYDLLLEYLHKT
KLTTMLGVINEHINFQVSPGQPSSISDDTEVVTLTGSSQDEATQINQKEIHWGLLEDSLE
ERLEKGGGLLSDSEKAEGETKEGELDENKKRSGEGAKQGMSIKKVKKDKGASATGKAGRP
EANTVPMAPRVKPELTLPVVHTDVEKSILEDLRNRVQLSSVSLPSVSFYTFINTHNGLNC
SSISHDGSLVAGGFSDSSLKIWDMAKLGQEPVGPVLQGENGTTSSEHVLGSRGGKRYTLF
QGHSGPVYSATFSPLGDFLLSSSADSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHY
FASSSHDRTARIWSMDRILPLRIMAGHLSDVDCVQWHVNCNYIATGSSDKTVRLWDVQSG
ECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTGRFITPLIGHTSCVWTLAF
SGEGSLLASGSADCTVKLWDVASSTKVPKTEEKWKYQQTKIIENSSNQVHTCLCIAVFSK
ESSICSWGSLKKRIGCPLSTQHYIDFGLLALRT
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaccaaatagagaagtttgtggcagagtacctgaagaagaaggggttcaag
caagctgagcacgctttccaagaagaacgacaacatcaacagagcaagaacacttcatcg
tcctccatcaccaccaattccctctctgaccctgacctcgccaagcacatcctcgccttc
tccgaattggagaatggtccggcacgataccatgatggatatagcaagtttaggtcatgg
acttatagttcactagatttgtacaagcatgagttgcttcgcgtgctttatcctgtattt
attcattgtttcatggatctggtggaaaaagggcatgttcaagaagcacgaacctttttc
aatagcttccgtgaagaccatgaaatgatgcactcgcgagaccttcaaaagttggaagga
gttctttctccctctcatctgggggagatggaatttgctcattctcttaggcagaacaaa
gtaaaaataaagatatgtcagtactcctatgacctactgctggagtatctacacaagaca
aaattgaccacaatgcttggggttataaatgagcatattaactttcaagtttctccaggg
cagcctagctcaatttctgatgatactgaagtcgtaacacttactggaagcagccaggat
gaggccacgcagataaatcagaaggaaatacattgggggctgcttgaagattctttagaa
gaacgcttggaaaagggtggaggtttgctctcagattctgaaaaggccgaaggagaaacc
aaagagggagaattagatgagaataagaaaagatcaggtgaaggagcaaagcaaggcatg
tcaattaaaaaggtcaagaaggacaagggtgcaagtgcaacagggaaagctgggcgtcct
gaggctaacactgtacctatggcaccacgagtcaaaccagagcttaccttgccagtagtt
cacacagacgtagaaaagtctattcttgaagacctaagaaaccgtgtacagttgagtagt
gtctcactgccatctgtcagcttttatacattcatcaacacacataatggtttaaactgt
tcatcaatatcccatgatggatctttggttgctggaggattttcagactcatctttgaag
atttgggacatggcaaagcttgggcaagaacctgttggccctgttttgcagggtgaaaac
ggtaccacttcaagtgaacatgttttagggtcaagaggtggaaaaagatatacattgttt
cagggtcattcagggccagtgtattctgccacttttagtccgctaggagattttttactt
tcctcttcagcagactcaacaattcggttatggagcacaaaactaaacgcaaatcttgtc
tgctacaaggggcacaattacccagtgtgggatgttcagtttagtcctgtaggacattat
tttgccagctcttcacacgatcgaacagcaaggatttggtctatggacagaatactgcct
ttaaggataatggcagggcacttatctgatgttgattgtgtgcagtggcatgttaactgc
aactacattgccactggctctagtgataaaacagtccgattgtgggatgtacaaagtggg
gagtgcgtccgaattttcattggtcacaggagtatggttttgtctttggcaatgtcgcct
gatgggcggtatatggcctctggtgatgaagatggcacaatcatgatgtgggatctctcg
actggtcggtttattacacctttgatcggtcacacctcatgtgtatggacccttgctttc
agtggtgaaggttctctacttgcatctggatctgctgattgcactgtaaaattatgggac
gtagcttcgagtacaaaggtgccaaagaccgaagaaaagtggaaataccaacagactaag
atcattgaaaactcttccaaccaagtccacacctgtctatgcattgcggttttctcgaag
gaatcttctatttgcagctggggctctctcaaaaagcgtatagggtgccctctctccact
cagcattatattgattttggtcttttagctctcaggacttaa
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