Corylus avellana (European hazelnut): 132190580
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Entry
132190580 CDS
T09426
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132190580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132190580
03036 Chromosome and associated proteins [BR:
cave03036
]
132190580
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132190580
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
132190580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
132190580
NCBI-ProteinID:
XP_059461598
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All DBs
Position
ca8:complement(12724927..12735754)
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AA seq
720 aa
AA seq
DB search
MLGVASDPGDGASVSGAGALVPFLPEARGPVVYPLHHGLKPPIARVAISWARGNSLRVSF
FRRASGDGSDGDEVGGKVLEVRLNNGDGDISDAQLRRVAYGSVSPFAVLQSRRNSVASLS
KISSPYHVEWWEYVMDYSKDINSLLGNPKSLPSPAIEDPQAVLQKVEEPTCLKAAWELME
VFYADKLSQAWLPERLVDWLTDYDSLLSSTQATIHLKVVDFQKELVTLQVIEDNTKYWEV
ISSALAVGWLDVVVKMLRLHGSYLLDQIGNRETENGLVEAVAVLISKMPRMRPALESGKL
GECYKAKPDFIKAWEKWRAQITKLESSAFWVHCDHHRTREGLRNMLQIMLGNINSLCTAT
CHWIELYISHFLYIRPFTVGLESMYSLAKKCMQLKPMTSSHTLIGLVIGILGDNTEVVLA
ECSRSFGPWMVAHALELLTAGSDEAETLLQEERYNLGGISIEELHRLVYAQVLSLDALTW
QLAPIYLTSCMKQGMGLLEILLSKQPVQHTQILLKIIEICRIYELDSISSNIMKIAGVYH
WKHGRKGSGVFWLQQARDEVRLNRIALQLFDSVGQSISDESFKQWEGLIELLGSDSKTAG
GLEFLRKYRDFKKSLKQVNDGKTTDVAQQAVESLISLMKNPSTPQRFWLPLLYDSLKLLS
WQERPLLNVSQTNLLLNKVQELSMARLRPDFIEAELPPQALGGVRLALATNLGRAILEEK
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgctcggcgttgcttcagaccccggagacggcgcctccgtgtccggcgccggagctctc
gttcctttcttgccggaggcccgaggcccggtggtctatcccctccaccacggcctcaag
ccgccgatcgctcgcgtcgccatctcgtgggcccgaggcaactccctccgcgtctcgttc
ttccgtcgagcatccggtgacggctccgacggagacgaagtcggcgggaaggtgttggag
gtgaggcttaataatggagatggagatatcagcgacgcgcagttacggagggtcgcttac
ggttccgtctcgccattcgcggttcttcagagccggaggaactcggtcgcgagcttgtcg
aagatctcgtcgccgtatcacgttgagtggtgggagtatgtgatggactacagcaaggac
ataaattcacttctcggtaatccgaagtcacttcctagtccagcgattgaagacccacag
gcagttttacagaaagttgaggagccaacctgtttgaaagctgcatgggagctgatggaa
gtattttatgcagacaagctatctcaagcatggctacctgaacgtcttgttgattggtta
actgattatgatagccttctctcctctacacaagcaacaatccatttgaaagttgtggat
tttcagaaagagcttgtcactttacaggttatcgaggataatactaaatattgggaagta
atatcatcagcattagctgttggctggctagatgttgtggtgaaaatgttgcgcttgcat
ggatcttatctgctagatcagattggcaatcgtgagacagagaatggactggtagaggca
gttgctgttcttatttccaaaatgccacgcatgcgtcctgcgctggaatctggaaaattg
ggtgaatgctataaagccaagccagattttatcaaggcttgggagaaatggcgggcacaa
attactaagctggagagcagtgcattctgggttcactgtgatcaccaccggaccagggag
ggcttgagaaatatgctacaaatcatgctgggaaatattaacagtctctgcactgcaaca
tgtcattggatagagctgtacatttctcactttctttacataaggccattcacggtgggt
ttagaaagtatgtatagcctagccaagaaatgcatgcagttaaaaccaatgaccagttcc
catacgttgataggacttgtgattggaattctaggagataatactgaggttgtcttagct
gaatgctccagatcatttggcccttggatggttgcccatgccctggagttgttgactgct
gggagtgatgaagcggaaactcttctacaagaagagcgttataacttgggtggaatcagc
atagaggaactccatcgacttgtctatgctcaagttctatctttagatgcattgacgtgg
caactagctccaatttatttgacgtcatgcatgaagcagggaatgggtttgttagagatt
ttattgagcaagcaacctgttcaacatactcaaatattgcttaagattatagagatatgc
cgtatatatgaacttgacagtattagttcaaacattatgaagattgctggagtataccat
tggaagcatggtaggaaaggttctggagtattttggcttcagcaagcccgggatgaagtt
cgtcttaataggattgccctgcagttgtttgattctgttggacaatcgatctctgatgaa
agtttcaagcaatgggagggattgattgaattgttgggttctgattccaagactgctggc
ggtcttgagtttttacgcaagtatagggattttaaaaaatccctgaaacaggttaatgat
ggaaaaactactgatgttgctcagcaagctgtagagtccctcatatcgcttatgaaaaac
ccatctacacctcagcgtttttggctgcctcttctgtatgactcgttgaagctgctcagc
tggcaggagcgtcctctgctaaacgtctctcagaccaacctcttgttgaataaagtgcaa
gagttgtcaatggcaaggctgcgaccggacttcattgaagctgagttgccaccgcaagcc
ttaggtggtgttaggctagctcttgctacaaatcttggacgtgctatcctggaagaaaaa
tga
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