Corylus avellana (European hazelnut): 132191402
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Entry
132191402 CDS
T09426
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132191402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cave04121
]
132191402
Enzymes [BR:
cave01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
132191402
Ubiquitin system [BR:
cave04121
]
Ubiquitin ligases (E3)
HECT type E3
132191402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
ZER1-like_2nd
UTP15_C
Ric8
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
132191402
NCBI-ProteinID:
XP_059462377
LinkDB
All DBs
Position
ca9:complement(17595098..17605312)
Genome browser
AA seq
1554 aa
AA seq
DB search
MGNRGQKRTEMIDELPADKRACSSLDFRPSSSNSSVQTHMNSSNSTHETHDNDMETSSSA
SASSRSEGEPERDSAYGSCDSDDAEQRHINLRQYRDYQRQRSSGDHGKFKRILTSLSEET
GPSGQVAALTELCEVLSFCTEDSLSGMVSDSLSPLLVNLAKHETNPEIMLLAIRAITYIC
DVYPRSSNFLIRHDAVPALCQRLMAIEYSDVAEQCMQALEKISREQPLACLQGGAIMAVL
NYIDFFSTTVQRVALSTVVNICKKLPSECPSPFMEAVPILCNLLQYEDRQLVEYVATCLI
KIVERVSESSELLDELCKHELIHQVIHLIDLNSRITISQPIYKGLIGILTKLSSGSFVAF
RTLYELNISSILKDILSTYDLSHGMTSPHMVDGHCNQVYEVLKLLYELLPTSARDPDVQQ
VSDKESFLVNSSSLLQKFGMDVLPLLIQVVNSGANLYVCYGCLSVINKLVYFSKSDMLLE
LLKNANISSFLAGVFTRKDLHVLLVALQIAEMILQKLSDIFLNSFIKEGVFFAIDALLTQ
ENCSQLMFPVFSGIQLSFDSSQKSASKEVLRCLCYAFATGQSPTASETGSCKLEKDSVHN
LAKHIRTNYFAPNLCDSEKGVTDILQKLRTFSTTLSDLVNMTIGNDASAQHEERFYHILL
QIMASLNGREPISTFEFIESGIVRSLLNYLSNGQYLGEKGKAQVGNGNFFVVEKRFEVFA
RLFLSSSEPHFVELPLFVLIQKLQSALSSLENFPVILSHGSKQRNSYAMIPNGRRALHPC
LKVRFVRGEGETCICAYSEDVQTVDPFSSLDAIEGFLWPKVNIKRNENINPPSCSKGQTE
SLPLDLPSNARTSPGESPDAMDPDSISTDLPNMQEDNANLSQPGPEQAVNQSTEQEIQLP
LEPDASMEMQHPASCSDEGASQKLVFYLEGQQLDQTLTLYQVILQKQMREHEFITGAKLW
SQVYTLTYKRAAEPIQGDSQECLQSDQNFCVSDKVGAYIQYTPFFSSMFACELTSDLERS
SSTYDILFLLKSLERLHRITFHLLSRERICAFAEGKIDNLDSLKVRVPSVPQNEFVSSKL
TEKLEQQMRDSLSVSPGGMPSWCKQLMASCPFLFSFEARCKYFRLAAFGQLQVQSHQLSQ
SNSGATSDRRPSSGSSPRKKFLVFRNQILASAAQMMDMHARHKVPIEIEYSEEVGTGLGP
TLEFYTLVSHEFQKSGLGMWREEAFASRTSLQVEDMGILVSPFGLFPCPWPSTLNASNEK
FYEVIKKFVLLGQVVAKSLQDGRVLDLHFSEAFYKIILGQELTLYDIQSFDPELGRTLLE
FQALVNRKMFLETINEENSPPEFDLCFRDTRIEDLCLDFTLPGYPDYVLASGPDHEMVNM
RNLEEYLSLIVDATINAGISRQVEAFKSGFNQVFPIEHLQIFTEEELERLLCGERDSWAF
NELLDHIKFDHGYTASSPPIVNLLEIIQEFDHGQRRAFLQFVTGAPRLPPGGLASLSPKL
TIVRKHCSNWADADLPSVMTCANYLKLPAYSSKERMKEKLLYAITEGQGSFHLS
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatcgtggccaaaagcgcaccgagatgattgatgaattgccagccgataagcgg
gcatgtagttcattggatttcaggccgagttcatcgaactcatcggttcagacccatatg
aactcctcaaattctacacatgaaacccatgacaatgacatggaaacttcttcatctgct
tcggcctcaagccgatcggaaggagaacctgagagggactcagcatatgggtcttgtgat
tctgatgatgcggagcaaagacacatcaatcttcgtcagtatcgtgattatcagagacag
agatcatctggtgatcatgggaaattcaagaggattttaacaagtttgagtgaggaaact
gggccttctgggcaagtggctgccctcactgagttatgcgaggtgttgtcattttgtaca
gaggattcactctcaggcatggtttcagactcattgtcaccgcttcttgtaaacctcgca
aagcacgagactaacccggaaataatgttactagctataagggctataacttatatatgt
gatgtgtatcctcgatcttcgaatttcctaattcggcatgatgcagttcctgctctttgc
caaagattaatggctattgagtactcggatgttgctgaacagtgtatgcaagcattggag
aagatttcacgggagcaaccacttgcttgcttacagggcggggcaattatggctgtcctt
aattatattgacttcttctcaacaactgtacagagagttgctctttccactgtggtgaac
atatgtaagaaacttccttctgaatgtccttcacctttcatggaagctgttcccatattg
tgcaatcttcttcagtacgaggatagacagcttgtcgaatatgttgctacttgcttgatt
aaaatagtggagcgagtaagtgagtcttctgagttgctggatgaactttgtaagcacgag
ctgattcatcaagtcatacatcttattgacttgaatagccgaatcactatatcccaacct
atttataaaggtctgattgggatacttaccaaactttcttctggttcatttgtagccttc
agaactctatatgagctcaatataagcagcatattgaaggatatattatccacttatgac
ctctcacatggaatgacttctcctcatatggtggatggccattgcaatcaggtttatgaa
gttcttaagttgctttatgagcttctacctacttcagctagagatccagatgttcaacag
gtgtcagataaggaatcatttttagttaatagctccagtcttctgcaaaaatttgggatg
gatgtacttcccttgttgatccaggtggttaattctggtgcaaatttatatgtttgctat
ggctgtctatctgttatcaacaagttagtttatttcagcaaatctgatatgcttcttgaa
ttgctgaagaatgccaacatttcaagttttttagctggagtattcactcgaaaggatctg
catgtgctgttagtagctctacagattgcggagatgatcttgcaaaagctttctgatatt
ttcctgaactcctttatcaaggaaggcgtcttttttgctattgatgcactgttaacacaa
gaaaattgttcgcagttgatgtttccagtgttcagtggcatccagttgtcatttgactct
agtcagaagtcagcttcaaaggaggttctaagatgcttatgttatgcttttgctactggc
caatctcctacagcatcagaaactggtagttgcaagcttgaaaaggattcagttcacaat
ctcgcaaagcacataaggactaattactttgcaccaaatttatgtgactctgagaaagga
gtaactgatattcttcaaaagctgagaactttttctactactttaagtgatttggttaac
atgaccatcggtaatgatgcttctgctcagcatgaagagaggttctatcatatattgctt
caaattatggcaagtcttaatggaagagaacccatttccacttttgagtttattgaaagc
gggattgtgagatcgttgctgaattacttatccaatggccagtaccttggagaaaagggt
aaggctcaggtggggaatggtaatttctttgttgtagaaaaacgatttgaggtgtttgca
aggctattcttgtcttcttcagagccccattttgtggaattacctctatttgtgctgata
caaaaattacaaagtgcactatcttctttggaaaatttccctgttattttgagtcatgga
tccaagcaaaggaactcatatgctatgatcccaaatggacgccgtgcattacatccgtgt
ctaaaagttcgttttgtgcgaggagagggggagacttgcatttgtgcgtattctgaagat
gttcagactgttgaccctttttcctctttagatgccattgaaggatttctgtggcctaaa
gttaatattaaaagaaatgagaacattaatccacccagttgctctaagggccaaacagag
agtttaccacttgacttaccatcaaatgcaagaactagtccaggagaaagtccagatgcc
atggatcctgacagtatatctacagatttgcctaatatgcaggaggataatgcgaacttg
tctcagcctggtcctgaacaagcagtcaatcaatctacagagcaagaaatacaacttcct
ttggaaccagatgccagtatggaaatgcagcatcctgcatcttgtagtgatgaaggtgct
tcacaaaaactggtattttaccttgaaggacaacagctggatcagacattgacactatac
caagtgattctccaaaaacaaatgagagaacatgaatttattactggtgcaaaattgtgg
agtcaagtttacacattaacatataaaagagctgcagaacctatacaaggtgattctcaa
gaatgtcttcagtcagaccaaaatttctgtgtatcagataaagtcggggcatatattcaa
tacactccatttttctctagcatgtttgcttgtgaactcacttctgacttggagaggtca
agttctacttatgatatattatttctgctcaaaagcttggaacgcttgcacaggattaca
tttcatctgctgtctcgtgaaagaatatgtgcttttgctgaaggtaaaattgataacttg
gatagtctgaaggtgagagttccttcagtgccacagaatgagtttgtaagcagtaagttg
acagaaaaactagaacagcagatgcgggactctctgtctgtgtcccctggtggtatgcct
tcttggtgtaagcagttaatggcttcgtgcccttttttgtttagttttgaggcaaggtgc
aagtacttccggttagcagcatttggtcaattgcaagttcaatctcatcaattgtctcaa
agcaattcaggagccacaagtgacaggcgacccagctctggcagctcgccgcgtaagaaa
tttttagttttccgcaaccagattctggcctctgctgcacaaatgatggacatgcatgcc
cgtcataaagtgcctattgaaattgaatacagtgaagaagttggtactggtcttggtccg
acattggaattttataccctggttagtcatgagttccagaagtctggcctaggaatgtgg
agggaggaggcatttgcctccaggacaagtttgcaggttgaggatatgggaattcttgtg
tcaccttttggacttttcccatgcccatggccatctacgttgaatgcatccaatgaaaaa
ttttacgaagtaatcaaaaagtttgtccttttgggccaagtagttgcaaagtctcttcaa
gatggaagggtcttggatctgcatttctccgaagccttctacaaaattatccttggccag
gaacttactttgtatgacatccagtcatttgatcctgagctcggtaggacattgctagag
tttcaggctcttgttaatagaaaaatgtttctggaaactattaatgaagaaaattcacca
cctgaattcgacttatgctttcgggataccagaattgaggatctttgccttgattttact
cttcctgggtatcctgattatgtacttgcttctgggcctgatcatgaaatggttaatatg
agaaacttggaggaatatctttcgctcattgttgatgcaactataaatgctggaatttcc
agacaggtggaagcttttaaatctggatttaaccaggttttccccattgaacatcttcag
atttttactgaagaggaactagagcgtttactatgtggagaacgtgattcttgggctttc
aatgagctcctggatcatatcaagtttgatcatggatacacagctagcagtcctcccatt
gtcaatttgctggaaattatacaagaatttgaccatggacagcgacgagcatttctgcag
tttgttactggggcacctaggcttcctccaggaggtttagcctctctcagtccaaagttg
actattgtacgaaaacattgtagcaactgggctgacgcagacctacctagtgtgatgaca
tgtgcaaattatcttaagctaccagcttactcttcaaaagagaggatgaaagaaaagctc
ttatatgccataacagaaggacaaggatcatttcacctatcatag
DBGET
integrated database retrieval system
