Corylus avellana (European hazelnut): 132191477
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Entry
132191477 CDS
T09426
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cave01009
]
132191477
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132191477
Enzymes [BR:
cave01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
132191477
Protein phosphatases and associated proteins [BR:
cave01009
]
HAD phosphatases
Fcp/Scp phosphatases
132191477
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
132191477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
DSRM_2
Motif
Other DBs
NCBI-GeneID:
132191477
NCBI-ProteinID:
XP_059462489
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Position
ca9:complement(21180122..21192303)
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AA seq
850 aa
AA seq
DB search
MSRLGFKSVVYHGDLCLGELDAIPVSDQNFQFPNNEIRIHHVSPPSERCPPLSILQTISS
FSVRCKLESSSPVEQSHLINLHAMCFYELKTAVVLIGDGEIHLVAMPSKQKKFPCFWCYS
VPAGLYNASLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRGWIARQTDPVRVSGM
AAEMKRYIDDRMLLKQYMESDFVVDTNGKAYKVQLEEVLRLSDNHERVVRPVIRLQEKNI
VLTRINPENRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE
AHLIGSNKLRDRVICVKSGSRKSLLNVFRDGMCHPKMAMVIDDRSKVWEDKDQPRVHVVP
AFTPYFAPQAETALAVPVLCVARNVACNVRGYFFKEFDENLLRRISEVFYEDEVVNLPSA
PDVSNYMMSEDAGFVPNGNANAPISEGMNGVEVERRLNLMDEKYINDLATPSLTSSPELR
YETSQPPLSVLPNVTGPASSRPLTPSQKPGLLGAPVRRDCIASDRDYDMKRGLLTTKRGP
DLRNQSSGEPPILSRLPTQSASVMQPQGGWLVEDDISRGHSNNRPLGFVQEAEPLKPDKQ
CAHLNPLPPSTPGSTPALFSQTFEEACAGYGLQKQNIPLASQLSEIGVSQNQVSNSRDVQ
TEAGKLSLLHSPLSIGVLHEIARRCSSKVEFRSVVSTSKDLQFSVEVFFTGEKIGVGMGK
TRKDAHQQAAENALHSLAEKYVAYIAPRSGAVDGDFDKLSLGNENGFLWDIVSPGTNELL
REDGLPKESTSEPGEGGSGNTSNVNQQVQKRATSPRLPNSIPSKRTKDELFRASQSLPSF
QQQKSGHPVS
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgattagggtttaaatccgtggtctaccacggtgacttgtgtttgggagagctg
gacgctatcccggtttcggaccagaatttccagttcccaaacaacgagattcgcatccac
cacgtgtcgccaccgagtgaacgatgccctccgctttcgatcctccaaacgatttcttcg
ttttcggttcggtgcaagctcgagtcgtcttcgccggtcgagcagtcccatctgatcaat
ctccacgccatgtgcttttacgaactcaagacggccgtggtattgattggagacggagag
attcatttagtggcaatgccaagtaagcagaagaagtttccgtgcttttggtgctattcg
gtccctgcaggtctgtacaatgcgagcttagggatgctgaatctgcgttgtctggcgatc
gtgttcgatcttgatgaaacgctcatcgttgcaaacaccatgaagtcgtttgaggacaga
attgaggcgcttcgaggctggattgcacgccagaccgatcctgtgcgtgtgtcgggaatg
gctgccgagatgaagcggtacattgatgatcgaatgctgttgaagcagtacatggagagc
gattttgtggtggatactaatgggaaggcatataaggtgcaattggaggaggttctgcgg
ctatctgataaccatgaacgagttgttcggcctgtaatacggttgcaagaaaagaatatt
gtcctcactcgtatcaatcctgagaatcgtgacacaagtgtgctcgtgaggttacgacct
gcttgggaggatttgagaagctatttgactgcaaaaggtaggaaacggtttgaagtttat
gtgtgcactatggcagaaagagattatgccttagaaatgtggaggcttcttgacccggag
gcacaccttataggttcaaataaactccgggaccgtgttatatgtgtcaaatcaggttcc
aggaaatcgttgctaaatgtcttccgggatggcatgtgtcatccaaagatggcaatggta
attgatgaccgttcaaaggtttgggaagataaggaccaacctcgagttcatgtggttcct
gcattcactccttattttgctcctcaggcagagactgctctcgctgttccagtcctctgt
gtagcaagaaacgttgcatgcaatgtcagaggttactttttcaaagagttcgatgagaat
ttattacgaagaatctctgaagtcttttatgaagatgaggtggtaaatttaccttctgct
cctgatgtgagcaactacatgatgtcagaggatgctggatttgtaccaaatggtaatgct
aatgctcccattagtgaaggcatgaatggtgttgaagttgaacgaaggttaaacctaatg
gatgagaagtatattaacgacttggctactccttcgttgacaagtagtcctgagttaaga
tatgaaacctctcagcctcctctttctgtcttaccgaatgtcactggacctgcatcttca
agaccattgacgccttctcagaaacctggtttacttggagctcctgttagacgagattgc
atcgcatctgatcgtgattatgatatgaagagaggactccttacaacgaagcgtggtcca
gatctaaggaatcaaagctcaggtgaacctcctattctgtcaagattacctacacaatca
gcatcagtgatgcagccacagggaggctggttggtggaagatgatatcagtagaggacat
tcaaataatcgacctttgggatttgttcaagaagctgaaccattaaaacctgataaacag
tgtgcccatctaaatccacttcctcctagcacaccaggatctactcctgctttattctca
caaacatttgaagaggcatgtgctggttatggtttgcaaaaacaaaatattccacttgca
agtcagctatcagagattggtgtatctcaaaatcaggtgtccaatagcagagatgttcaa
actgaagctgggaaattgagcctgctacattctcctttatccattggagttctgcatgaa
attgcacgtagatgcagctccaaggttgagttcaggtctgttgtaagcaccagtaaagat
ttgcaattttctgttgaggtttttttcactggtgagaagataggggttggaatgggtaag
acaaggaaagatgcgcaccaacaagctgctgagaatgctcttcacagcttagcagaaaaa
tatgtagcatatattgcacctcgttctggggctgttgacggagattttgataagctttcc
ctcggaaatgaaaatggatttctatgggatatcgtcagtcccggcacgaatgaactgcta
agagaagatgggttgcccaaagagagcacttctgagcctggtgaaggtggatctgggaat
acttctaatgtaaatcagcaagtacagaagcgagccacttccccaaggttaccgaattct
attcctagtaaacgaacgaaggacgaactatttcgtgcttcacagagcctaccgtctttt
cagcaacagaagagcgggcatcctgtttcatga
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