Corylus avellana (European hazelnut): 132191481
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Entry
132191481 CDS
T09426
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132191481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132191481
Enzymes [BR:
cave01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132191481
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
132191481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF2635
S_100
Motif
Other DBs
NCBI-GeneID:
132191481
NCBI-ProteinID:
XP_059462497
LinkDB
All DBs
Position
ca9:5097352..5131701
Genome browser
AA seq
1691 aa
AA seq
DB search
MAQPLEGTTKSFEAVGFSFFTDEEVRKHSVVKITNPILLDSMDRPVPGGLYDPKLGPLAE
RMHCKTCEQLSLLCPGHFGHIDLVSPVYNPLLFNILHSLLQSTCFFCHHFRASRSQVETC
VSQLELIVKGDVVGAKRLGSNTLSETSYPDDIDASQYSDKAHLCKQGWTSLQFTEAMSAL
RKLLKPRSGVCKNCEARNPKISKPTFGWFYMSGMSGGNARRNAIQGCKVGRSLTGGTNGN
TLLEVQNTNDMTPLGDVVDTAETETSSATSSGAQDSPTRRHRRKGGEVPLEFFKQKGLFS
GPLLPSEVKEIVKLLWENERQLCSFISDIQQQGLQRKDAYSMFFLETILVPPTKFRPPSK
GGDSVSVIEHSQTILLEKVLQSNISLGNAHVNNLEYSKIVRLWMDLQQSINVLFDSKTAT
GQGRRDVTSGICQLLEKKEGMFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRL
TYPERVTPWNVEKLRKAVINGPDIHPGATHYIDKLIPAGQSQKERDRRTSISRKVPSSQG
LLTQHGKGCDYEFEGKFVRRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYA
NCSTYNADFDGDEMNVHFPQDEISRSEAYNIVNANNQYVKPTSGEPIRSLIQDHIISAVL
LTKKDTFFNRDQFNQLLYCAGLSASSPVPFFGKFGQKVCILNSEDEMKPLLPAIWKPEPL
WTGKQVISALLNHITKGLPPFSVEKDAKLPRDFFKSRSDEDELDKEKLRGRRKVDEDASK
RKEPDEDKLLIYKNDLVRGVIDKAQFGEYGLVHMVHELYGSNTAGILLSALSRLLTNFLQ
MHAATCGVDDLLLMSKKDYEREKNLQDCEKVGEDVHLLFVNGKGGDEIADADVLRVNIEK
KIRSNGESAVTDLDRKMISRLNEELSKNFFKELLSKGLYKPSGKNCISLMTTSGAKGATV
NFQQISSHLGQQELEGKRVPRMVSGKTLPCFSPWDWAARAGGFIIDRFLSGLHLQEYYFH
CMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKICYDHTVRDADGSIVQFRYGEDGVDVH
QTSFMANFEALAANQEIIFTKCCQELHKSNSYIKELPDALKEKARDFMHKFSLKKRNPDI
LKEEDFLKLMEHKYVLSLAQPGEPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIP
RLQEILMTASSDIKTPVMTCPFQLGSSKDDASRLADKLKKITVADIIKSMKVSVMPAAVH
NHQNCRIYKLEMMLYVPENYPKHTDISLEDWEESLKVVFVRALEDAIQNHLLLLSKINGI
KNFMPDSQSDASNGTNDDVPGNTSERQEDNDDDDDVDDGGSEDLGTDAQKRKQQATDEMD
YEDTSDEEPNEEELTSGSESEIDHVENEIEVSKDDLIGMPDAKDKTSELSGPRKSSKKKS
GGKKNQPEVKKKKSSRRKLVKKEYDRACFVKAKGMHFEVHFRFIDEPHILLAQIALKTAK
KVYIQSFGKIDGCKVISCKEKQVIYYGVNPKDRKSISSAEKEKLPALQTTGVDFSTLWQF
QDALDVRYLYSNNIHAMLTTYGVEAARETIIREIQHVFGSYGISVNMRHLTLIADYMTHS
GGYRPMNRLGGIAESISPFCKMSFETAAKFIVGASYHGETDDLESPSARICVGLPVKMGT
GCVDLMQNLKI
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacccctagagggtactacgaagtcttttgaagctgttgggttcagtttcttt
acagatgaagaggttcgaaagcatagtgttgttaagattacaaatccaattttgcttgat
agtatggacagaccggtgcctggtggattgtatgatccaaaattgggcccactagctgaa
aggatgcattgcaagacatgcgagcagctttcattgctttgcccaggccattttggtcac
attgaccttgtttcaccagtctataatccgttgctcttcaatattctccacagtcttctt
cagagtacttgtttcttttgtcaccatttccgggcaagcagaagccaggttgagacatgt
gtttctcaattggaactcattgtgaaaggggacgttgttggggccaaaaggttgggctcg
aatacattgagtgaaacctcatatccagatgacatcgatgcgagccagtatagtgataag
gcacatttatgtaagcaaggatggacctctcttcagtttactgaggcaatgtctgctttg
agaaaattgctgaagccaagatctggggtttgtaagaactgtgaggccagaaatcctaaa
atcagtaaacctacttttggatggttttatatgagtggtatgtcaggtggcaatgctaga
cggaatgcgattcaagggtgcaaggtgggaaggtcattaactggtggaactaatggaaat
actttgcttgaggtgcaaaacaccaatgatatgactcccttgggggatgttgttgatact
gctgaaacagaaacctccagtgctacctcttctggagctcaagatagtccgacaagaagg
catagaagaaaaggaggggaagtgcctcttgagttctttaagcagaagggtttattttcg
ggacctctattaccatcagaggttaaagaaattgtgaagcttctttgggaaaatgagaga
cagctctgctcatttatcagtgatatacagcagcagggacttcaaaggaaagatgcttac
tctatgttcttcttagagactattcttgtacctccaaccaaattccgccccccatccaag
ggaggtgattcggtttcagtaattgagcattctcaaactattttgttggagaaggtgcta
cagtccaatatttcattgggaaatgcgcatgttaacaacttagaatactcaaagattgta
cggctgtggatggacctccagcaatctataaatgtgttgtttgatagcaaaactgctaca
ggtcaaggtcgaagagatgtaacttcaggaatttgtcagttactggaaaagaaggaaggc
atgttccgccagaaaatgatgggaaagagggttaattatgcttgccgctctgtcatatcc
ccagatccctatttagctgtaaatgaaataggaattcctccatactttgcactaagatta
acctatcccgagagggtgactccttggaatgttgagaagttgaggaaggctgtcatcaat
ggtcccgatatccatcctggagctacacactacattgataagctaataccggcaggccaa
agccaaaaagagcgtgatcgccgcacatcaatatcaagaaaagtaccatcctctcaaggt
cttctcacgcaacatgggaaaggctgcgattatgaatttgaaggcaaatttgtacgtcgc
cacttgcaagatggggatattgttcttgtaaacagacagccaactcttcacaagcccagt
ataatggcacatgtagttcgtgtgttaaaaggggaaaaaacaattcgtatgcactatgca
aactgcagtacatataatgctgattttgatggtgatgaaatgaatgtacatttccctcaa
gatgaaatttctcgttctgaagcttacaacattgtaaatgcaaataatcaatatgtcaag
cccacaagtggtgagcccattagatccttgattcaggatcatatcattagcgctgtgctt
cttacgaagaaggatactttttttaatcgtgatcagttcaaccagcttctttattgtgct
ggcctctccgcatctagtccagttcctttttttggaaaatttggccagaaagtttgcata
ttaaactctgaagatgagatgaaaccccttctgccagcaatatggaaaccagagcctctt
tggactgggaaacaggtcattagcgccttgctaaatcatattaccaaaggtctcccgcca
ttttctgttgaaaaagatgcaaaactccctcgtgattttttcaagagtagaagtgatgaa
gatgaactggacaaagagaaactaaggggacggagaaaggttgatgaagatgcttcaaag
agaaaggagcctgatgaagataaattgttgatatataagaatgacttggtgcgtggtgtg
attgacaaggcccagtttggtgaatatggtttggttcatatggtgcatgagctctatggc
tcaaatactgcaggcatcctgctttctgcgttgagtcgtttattgacgaactttttgcag
atgcatgcggccacatgtggagtagacgatcttttgctgatgtcgaaaaaagactatgag
agggaaaaaaatcttcaagattgtgagaaagttggtgaagatgttcatcttttgtttgtt
aatggcaagggtggtgatgaaatagcagatgcagatgttctgcgagtgaatattgaaaaa
aagatacgtagtaatggagaatcggccgtaacagacttggataggaagatgataagtaga
cttaatgaggaattaagcaagaacttcttcaaggagctgttgtccaaagggttatataaa
ccctctggaaagaactgtatttctctcatgactacatctggggctaagggtgctacagtc
aatttccagcaaatatcttctcatttaggccaacaagagttagaaggcaaacgagtccct
cggatggtttctggaaagactttaccctgcttctctccatgggattgggcagctcgagct
ggaggctttattattgatcgctttctctctggtctccaccttcaagaatattactttcat
tgcatggctggtcgtgaagggttggttgacacagcagtgaaaacatctcgcagtggatat
cttcaaagatgcctaataaaaaatcttgagtgcctaaaaatttgttatgatcataccgtt
cgtgatgctgatggttccattgttcaatttcgctatggagaagatggtgtggatgtccat
caaacaagtttcatggcaaactttgaagcactggcagcgaatcaagaaataattttcaca
aaatgttgtcaagagcttcacaaatccaatagttacattaaggaattgcctgatgctctt
aaagaaaaagcgagggactttatgcataaattctccttgaagaagagaaatcctgatatt
ttgaaagaagaggatttcttgaagttaatggagcacaaatacgtcttaagtcttgcacaa
cctggggaaccagttggtgtgcttgctgggcagtctgtaggagagccatcaacacagatg
acgttgaatacgttccatcttgctgggcgaggtgaaatgaatgtgacgcttggaattcca
cgtctacaggaaatcttgatgactgcatcaagtgatattaagacacctgtgatgacatgc
cccttccaattagggagctcaaaggacgatgcctctcgacttgctgataagttgaagaag
ataactgtagcagacattataaagagtatgaaagtatctgtcatgccagctgctgttcat
aatcaccagaattgccgtatttataagcttgagatgatgctttacgtacctgaaaactat
ccaaaacacactgatatttcattagaagactgggaggaaagcctgaaggttgtttttgtg
agagcgttggaggacgccatacaaaatcatctgcttttgctttctaaaattaacggcatc
aaaaatttcatgccagattcacaatcagatgcttcaaatggaacaaatgatgatgtacct
ggcaacacatcagaacgccaggaagacaatgatgatgacgatgatgttgatgatggaggg
tctgaggatcttggtacggatgcacaaaagagaaaacagcaagcaacagatgagatggat
tatgaggatacttctgatgaggaaccaaatgaagaggaactaacatctggctctgaaagt
gaaattgaccacgtagagaatgaaattgaagttagtaaggatgatttgattgggatgcct
gatgcaaaagataaaacatctgaactatcaggacctaggaaatcctctaagaaaaagtct
gggggcaaaaagaaccaaccagaagtaaaaaaaaaaaagagttccagaagaaaactagtc
aaaaaagagtatgatagagcatgttttgtgaaagctaagggaatgcactttgaggtccat
tttcggtttatcgatgaacctcatattttactggctcagattgctctgaaaactgccaag
aaggtttacatccagagctttggtaagattgatgggtgtaaagtcatttcatgcaaagaa
aaacaagtgatatactatggtgtaaatcccaaagaccggaagagtatctcatcagcagaa
aaagaaaaacttccagctctgcaaaccaccggagtggatttcagtacattgtggcagttc
caggatgctcttgatgtcagatatttatattccaataacatccatgcaatgctaaccact
tatggagttgaagctgccagagaaactatcatcagggaaatacagcacgttttcggctct
tatggtatttccgtcaatatgcgccacctaacccttattgctgactatatgactcattcg
ggtggctatcgtccgatgaatagacttgggggaatagccgagtcaatatctcctttttgt
aagatgtcttttgagacagctgcaaaatttattgttggagcatcatatcatggggagaca
gatgatttggagtctccgtcggctaggatctgtgttggattaccggtgaagatgggtact
ggatgtgttgatttgatgcaaaatttgaaaatctga
DBGET
integrated database retrieval system
