Corylus avellana (European hazelnut): 132191612
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Entry
132191612 CDS
T09426
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132191612
Transcription machinery [BR:
cave03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
132191612
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Motif
Other DBs
NCBI-GeneID:
132191612
NCBI-ProteinID:
XP_059462684
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Position
ca1:1197413..1229843
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AA seq
517 aa
AA seq
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MGVVTVSSSAARTPLGLSGKFSAQRSTLKRPLIVAFKADKSNSSALVAPQEQIPLPIETS
KDRRKRLGKAGKPLRRVKAVVTDEASPSTTLEVDYNEAAAQLENIYKRSPTSDTSDVENV
GGMMSKSQQRRRKISRGDEKAERRTGYNVIKNQVKKVKRLSLDKRIALKKNKEDKVVAPM
RKRKDVKDENVKIEKLVREYSASTDLVSLDWKKMRIPPVLPSSEHVWLFKLMQPMKALLQ
VKENLQKDLGREPTEGELAEAMKMNVVQVRKRMEVGRAARNKLIKHNLRLILFVINKYFQ
DFANGPRFQDLCQAGVKGLITAIDRFEPKRRFRLSTYSLFWIRHAIIRSMTLSSFTRVSF
GLESVRVEIQRAKLELLFELHRLPTEEEIVKKVGISPERYQEVMKAVRPVLSLHSRHATT
QEEYIKGITDVDGVGADNWRQPALLRIALDDVLDSLKPKESLVMRQRYGLDGKGDRTLGE
IAGNLNISREMVRKHEVKALLKLKHPARVDYLRQHLL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttccagctcagctgctcgaactccgcttggtttgagtgggaaa
ttctcagctcaacgctctactttgaaaagacccttgatagtagcttttaaagcagataaa
tccaatagcagtgcattggttgcgccccaggagcagatccctttgcccatagaaaccagt
aaggatagacggaagagactaggaaaagctggcaaacctttgagaagagtaaaagctgtc
gttacagatgaagcttctccgagtaccaccttggaagtggattacaatgaagccgccgcc
cagcttgaaaacatatacaagcgaagcccaacatctgatacttctgatgtggaaaatgta
ggtggcatgatgagtaaaagccagcaaaggaggaggaagattagtcgtggtgatgaaaaa
gcagagaggagaaccggctataatgtgattaagaaccaagtaaagaaggttaaaaggttg
agtcttgataaaaggattgcattgaaaaagaataaagaagataaagtggttgctccaatg
cggaagaggaaagatgttaaggatgaaaatgtgaagattgagaagcttgtaagggagtac
tcagcttcaactgatttggttagtttggactggaaaaaaatgaggatacctcctgttctt
ccttcttctgaacatgtttggttgttcaagttgatgcaacccatgaaggcactccttcaa
gtgaaagagaatttgcagaaagatttggggagagaaccaacagaaggcgaattagctgaa
gcaatgaagatgaatgtagttcaagtgcgaaaacgcatggaggttggtcgagctgcaaga
aacaagctcattaagcacaatctccggctcattttgtttgtaatcaacaagtatttccaa
gactttgcaaatggcccaaggtttcaagacctttgccaggcaggagtgaaaggacttatt
acagccattgatcgttttgaaccaaaaaggagattccggctctccacttatagtcttttt
tggattaggcatgccattatacgctccatgacactctcaagctttactcgtgtttctttt
ggccttgaatcggttagagtagaaatccaacgagccaaacttgagttgttgtttgagctt
catagattacccacagaggaagagatagtaaaaaaagttgggatctcccctgagaggtat
caggaagttatgaaagccgtgagacctgttctctctctccattcaaggcatgcaaccaca
caagaagagtacattaaggggatcactgatgttgatggtgttggagctgataactggagg
caacctgctcttctcaggattgctcttgatgatgtgcttgattctctaaagcccaaggag
agcttggtaatgaggcaaagatacgggcttgatggtaaaggtgatagaacattgggagag
attgctggaaacttaaatatttcaagagaaatggttcggaagcatgaagtgaaggctttg
ctgaagctcaagcatccagctcgagtggattatcttcgccaacatttactataa
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