Corylus avellana (European hazelnut): 132191816
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Entry
132191816 CDS
T09426
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic isoform X1
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132191816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cave03400
]
132191816
Enzymes [BR:
cave01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
132191816
DNA repair and recombination proteins [BR:
cave03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
132191816
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
Motif
Other DBs
NCBI-GeneID:
132191816
NCBI-ProteinID:
XP_059462905
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Position
ca9:complement(3700893..3710512)
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AA seq
551 aa
AA seq
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MRQALQLGLRWFMNLPSSAVGLRRNLQGIGTLVCFRVRAMGSKRQLSNSLVPVSSEDKKD
KRLKGLMGTNPNSEKGVVEEYGVRSSSVEIERFKDDPATIEAMTVQELRTALRSVGVPAK
GCKRDLVYALKCFVDKKMDGENSLAVEEQASSISAENISVKTKVKNLSTEDSVEDVNTDL
EVPGFPQHKGRVKKSAAESNTVEFQIKKVTTKKGLSIRSDEVPGGKVSRAKRKVSSNIVT
EVGNADEGINTPIIQTEPWTVLAHKKPQKGWIPYNPRTMRPPPITRDTNSVKLISWNVNG
LRALLKLEGSSAFQLSQREDFDVLCLQETKLQEKDVENIKQCLIDGYENSFWTCSVSKLG
YSGTAIISRIKPLSVRYGLGISDHDSEGRLVTAEFDSFYLLNGYVPNSGDGLKRLSYRVT
QWDPALSNYMKELEKSKPVILTGDLNCAHEEIDIYNPAGNKRSAGFTDEERQSFGTNFLS
RGFVDTFRRQHPGVVGYTYWGYRHGGRKTNRGWRLDYFLVSESMADKVYDSYILADVGGS
DHCPIGLVLKL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaggcattgcaattggggcttaggtggttcatgaaccttccaagctctgcagta
ggtctgaggaggaatttacagggaattggaacattggtttgttttagagtaagagcaatg
gggtctaaacggcagctctcgaattccctggtacccgtgtcatctgaggacaagaaagat
aagagactgaagggattaatgggtacaaatccgaattctgagaagggtgttgtcgaggaa
tatggtgtgagaagctcttcagttgagattgagagatttaaggatgacccggcaacaatc
gaggcaatgacggttcaagagctcagaactgcattgaggagtgtgggggttcctgctaaa
ggctgtaaacgcgatcttgtgtatgctttgaagtgttttgtggacaagaagatggatggt
gaaaattctctggcggtagaagaacaagcatcctccatttctgctgaaaatatatcagta
aagactaaggttaagaatttatctactgaagacagtgttgaagacgtgaacactgatttg
gaggttcctggatttccacagcataagggaagagtaaagaaatctgcagctgaaagtaat
actgttgagttccagattaaaaaggtcacaacaaaaaaggggctgtcaatcagatctgat
gaggttccaggtgggaaggtctcccgggcaaagagaaaagtttcttcaaacattgttact
gaagttggcaacgctgatgaaggaattaatacccccatcatacaaactgaaccatggacg
gttcttgcccacaagaagcctcagaaaggttggattccatataatcctagaaccatgagg
cctccacctattaccagggataccaattctgtgaaactcatctcttggaatgtcaatggg
ttgagagctttattgaagttagagggatcttctgcatttcaactttcacaaagggaagat
tttgatgtgttatgcttgcaagagaccaaactacaggagaaggatgttgaaaatatcaaa
cagtgtcttatagatggctatgagaatagcttctggacttgcagtgtttccaaacttggt
tattctggaacagcaattatctcaagaataaaaccgctttcagtcagatatggcctaggc
atatcagatcatgatagtgaaggtcggcttgtgacggcagagtttgattcattttatcta
ttgaatggatatgtccctaattctggagatggcttgaaaagactgtcatacagggttaca
caatgggatccagctctcagcaattacatgaaagagctggaaaaatcaaagcccgtcatt
ttgactggtgatctgaattgtgctcatgaagagatagacatatataatcctgctggaaat
aaaagaagtgctgggtttaccgatgaagaaaggcagtcatttgggacaaacttcttgtct
aggggatttgtggatacctttagacggcaacacccaggagttgttggctatacttactgg
ggttatcggcacggtggtcgcaaaactaacagaggatggcggctcgactacttccttgtc
tcagaatccatggccgacaaggtttatgactcctatattctagctgatgttggcggtagt
gatcattgtcccattggccttgtacttaagctttag
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