Corylus avellana (European hazelnut): 132191903
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Entry
132191903 CDS
T09426
Name
(RefSeq) mRNA-decapping enzyme-like protein isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132191903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132191903
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132191903
mRNA degradation factors
5'-3' decay
Decapping complex
132191903
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
132191903
NCBI-ProteinID:
XP_059463013
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Position
ca9:2648128..2654890
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AA seq
365 aa
AA seq
DB search
MSQTGKLMPNLDQQSTKMLNLTVLQRMDPFIEEILITAAHVTFYAFNIESSQWSRKDVEG
SLFVVKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYELQVPYLLYRNASQEVNGIWFYNP
QECKDVGNLFTRILNAYSKVPSKLKVSSSKSEFEELEAVSTMSVMEGSLEPSSSATDAPE
DSSFRNIFSAATSIGNSGSNLANSRQSAQPAYPSSAAIPLSSHSPSVVSSPAPTLQIPSL
SLLSSSNPTPLQDTLDPISNSNRGTNLLKPSSFFAPPSSSALIMPPISSSVPTAPSLNLQ
RPYGTPMPHPFPLSTPLSSLTPSSASPIDGLLISRDRVRDALLVLVQDDQFIDMFYKALV
KVHHP
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaccggaaaattgatgcccaatctcgaccagcagagcaccaaaatgctcaac
ctcaccgtgctccagagaatggaccccttcatcgaagagattctcatcaccgcggcgcac
gttacgttctatgcgttcaacatcgagagcagccaatggagtcgtaaagacgttgaagga
tctctttttgtcgttaaaaggaatactcaaccgcggttccaattcattgtaatgaatcgg
cgtaacacagataacctagtggagaatcttttgggagattttgagtatgaacttcaagtt
ccatatctgttgtaccggaatgcatcccaagaggttaatggtatttggttttacaatcca
caggagtgtaaggatgttggaaacctatttactaggattcttaatgcgtattcaaaagtt
ccttcaaagttaaaagtatcttcaagcaaaagtgagtttgaggaacttgaagcagtctca
accatgtcggtgatggaaggttctctggagccatcatcatctgccactgatgctcccgaa
gattcttcctttcgaaacatttttagtgcagctacgagtattggaaacagtggttcaaat
ctagcgaactcaagacagtcagcacagcccgcctacccttcttctgcagctatcccttta
tcttctcattcacccagtgttgtttcttctcctgcaccaactctacaaataccatcactc
tctcttctgtcttcatctaatccaaccccactccaagacactcttgatccaatcagcaac
agcaatcggggcactaatcttctgaagccctcttcattctttgcacccccttcctcgtct
gcattgataatgccacccatctcttcatctgtaccaactgctccttcactgaatttgcaa
cgcccatatggcactccaatgcctcacccctttccactatctactccactatcgtctctt
actcctagttctgcttctccgattgatggactgcttattagcagagacagagtacgtgat
gcacttctggtgcttgttcaggacgatcaatttattgacatgttttacaaagcattggtg
aaggtgcaccatccatga
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