KEGG   Corylus avellana (European hazelnut): 132192036
Entry
132192036         CDS       T09426                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cave  Corylus avellana (European hazelnut)
Pathway
cave03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cave00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132192036
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cave03019]
    132192036
   03041 Spliceosome [BR:cave03041]
    132192036
Messenger RNA biogenesis [BR:cave03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     132192036
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     132192036
Spliceosome [BR:cave03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    132192036
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8 RRM_Nup35
Other DBs
NCBI-GeneID: 132192036
NCBI-ProteinID: XP_059463205
LinkDB
Position
ca9:6719599..6720995
AA seq 499 aa
MARKRKLDSKSDLATEPPKKQQQQRKQKEEDRTHIKVEVDQDDEYEYEYEYEYEEEEEEE
EEEEEEEGEDEEEDEDEEDEDLYKPKNADNQTANTSTSAADRDSEDDDDEPIQKVLEPFS
KEQIINLLCEAVRKHPDVADRIQKVADEDPAHRKIFVHGLGWDTNTETLSNAFKQYGEIE
DCKAVCDKVSGKSKGYGFILFKTRGGARKALKQPQKKIGNRMTACQLASMFPVAQPNATA
AASTPPLSEYAQRKIYVSNVGAELDPQKLLMFFSKYGEIEEGPLGLDKMTGKPKGFCLFT
YKTVESAKRALEEPHKNFEGHTLHCQKAIDGPKPKKSHPNQLQYQHHQLQYQPHQNPHNA
QFQRNENPALVGGAAAAAPGHLMAPPTGAGIGLNQGAAAAQALNPALGQAIAALFASQGA
GLGLTNLLGTLGSAAAMNPGVPAAAAGHAYTNQANIIGGYGNQGGMQGGYPNQQAGQGGS
GRGQHGVVQYGGVPPYMGH
NT seq 1500 nt   +upstreamnt  +downstreamnt
atggcgaggaagcgaaagctcgactccaaatccgacctggcaaccgagcccccgaagaag
caacagcagcaacgaaagcagaaagaagaggatcgtacccacatcaaagttgaggtagac
caagacgacgaatacgaatacgagtacgaatacgaatacgaagaagaagaagaagaagaa
gaagaagaggaagaagaagaaggggaagacgaagaagaggatgaagacgaagaagacgaa
gatctctataaacccaagaatgccgataatcagacggcgaacacctccacgtcagccgca
gatcgagacagtgaggatgatgacgatgaacccatacagaaggttcttgaaccgttcagc
aaggagcagattataaaccttctctgcgaagcagtgcgtaagcatccggacgtggcggat
cggatccaaaaggttgcggacgaggacccggcacaccgaaagatcttcgtccacggactc
gggtgggacacgaacacggagacactctccaacgcgttcaagcagtacggcgagatcgag
gattgcaaggccgtgtgcgacaaggtctctggcaaatccaagggctacggtttcatcctc
ttcaagacccgcggcggggcccggaaggccctcaagcagccccagaagaagatcggcaac
cggatgactgcgtgccagctggcctcaatgtttccggtcgcacagccaaatgccaccgcg
gcggcctccacgccgcccctttcggaatatgcgcagaggaagatatacgtgagcaatgtt
ggggctgagttggatcctcagaagctgcttatgttcttctccaagtacggagaaattgag
gaagggccattggggctcgataagatgaccgggaagcccaaggggttttgtttgttcacg
tacaagacggttgaaagcgccaagagggctctggaagagccgcacaagaatttcgaggga
catacattgcactgccagaaggctattgatggtccgaagccgaaaaagtctcaccctaat
cagcttcagtatcagcatcatcagcttcagtatcagcctcaccagaaccctcacaacgcc
caattccagaggaatgagaaccccgctcttgttggtggagccgcagcggctgcaccgggt
cacttgatggctccccccaccggagcggggattgggttaaatcagggggctgcggcggct
caggcgttgaatcctgcgcttgggcaggcaatagcggcgttgtttgcaagtcaaggtgcc
gggttgggcctgactaatctgttggggacgctgggatcggctgcagccatgaacccaggt
gtgcccgcagctgctgcggggcacgcttatacgaaccaggcaaatataatcggagggtat
gggaatcaagggggaatgcagggtggataccccaaccagcaagctggacaaggtggttcc
ggaagaggccagcatggtgtcgtgcaatatggtggcgttccaccttacatggggcactag

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