Corylus avellana (European hazelnut): 132192053
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Entry
132192053 CDS
T09426
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03440
Homologous recombination
cave03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132192053
03460 Fanconi anemia pathway
132192053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cave04121
]
132192053
03036 Chromosome and associated proteins [BR:
cave03036
]
132192053
03400 DNA repair and recombination proteins [BR:
cave03400
]
132192053
Ubiquitin system [BR:
cave04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
132192053
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
132192053
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
132192053
FA (Fanconi anemia) pathway
Downstream FA components
132192053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
132192053
NCBI-ProteinID:
XP_059463226
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All DBs
Position
ca9:complement(21928940..21936589)
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AA seq
1116 aa
AA seq
DB search
MSTWQIFSDAGNSFRWEIYDRDLQINPDDEHFDSPNGSSRLPSMSDLVLQGCSKLLENRD
EGVGSSPMFRTGLGKSVAVKQSSIAKALSVLGDDTGQVLARDNGCGSSNSLFQTGSGKTV
NISSDGLVRAKTLLGLEEDNDNCIFQGLQHSVKPYNPNGPFGWKSPSHSEMRDCVSNCDI
KDGTSVSRPLLTSMSGSAGSRLKNQANPNVMQPEMQSSALKPPPIKFHTAGGRSISVSSD
ALKRARSLLGDPELGTFLNEEDADDSLFSFSEARFNDILSNEGNDPCTPFYCEEMANNKN
SSKSFVTPLRSSSNQVQLSVKSEHIISGNNLIKEFDAVHYDSVCRLNTNASSLEKRLSDR
QGDPNTAAKSSLANGVSSRISPLGRSPARPLVDISNTIGTVCKNNGQIANVKRILGKSSA
SPFKKPRSSKFSTPLNKNVPLVPNGLSTLPSEHSSCRKRISSRYPFQIPRMYVKEYFKAP
PLHQNTLELLSDQVRCITSTNAEKYMFHDESGLNCIGPEAFFHILAQSGASMQYASKEWV
INHYKWIVWKLACYERSYPTKAAGKFLTVSNVLEELKYRYEREVNHGHRSSIKRILEGDA
SPSSMIVLCISAICSNCDLKTETSSMAAIGDECSSTTKVELTDGWYAMDAVLDVPLSKHL
AAGKLYVGQKLRIWGAGLCGWVGPVSPLEVSRTVSLLLHGNGTYRAHWADRLGFCKGVGS
PLAFRCIKCNGGPVPRTLVGVRRIYPVLYKERLGNGGSIVRSERMESKMVQLYNQRRATV
VEGIISEFQRDIKGSHDFDDNDSEEGAKILKILETAAEPEVLMAEMSPEQLTSFTTYQAK
LEATRQANTDKAIEKALEAAGLGEREVTPFMRVRIVGLTKKICHGMDSPKEGLITIWNPT
EKQQHELVEGQAYGIAGLVPFNSDADTLYLQARGSTTKWRPLSSQATEHFKPFHNPRKSV
LLSNLGEVPLSSEFDIAAVVVHVGEVFTAPHQKKQWVFVTDGSISESQSEDLSNSLLAIR
FCTPYINDGSFAPINSNLAGSTVCFCNLIKRAKDQLNHLWVAEATENSIYFLNSDPPHCA
HLKNAAAFAQRWAQISSLTIDKLREKVLFIIGDCKS
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcagatattctccgacgccggcaacagtttccggtgggaaatctacgac
cgagacctccaaatcaatcccgatgacgaacattttgattcaccgaacggcagctctcgt
ctaccttccatgtcagatcttgttctccaagggtgttcgaagcttctggaaaatcgcgat
gaaggcgttgggagctctccgatgttccgaaccgggttgggaaaatcggttgcggtgaag
cagtcttcgatagccaaggcattatctgttctcggcgacgacacaggccaagtgctagct
agagataatggatgtggttcctcaaattctctcttccagacgggctctgggaaaactgtc
aatatatcttcagatggtctggttagagctaaaacattgttgggattggaagaagataat
gataattgtatttttcaaggtcttcaacattcagtgaagccatataatcccaatggacca
tttggatggaaaagtccatcccattcagaaatgagagactgtgtgagcaattgtgatatt
aaggatggtacatcagtttcgagacctttgttaacttccatgtctggttcagcaggaagc
agattgaagaatcaggcaaatccaaacgttatgcaacctgaaatgcagagttcagctctc
aaaccacctccaatcaagttccacacggcaggtggaagatctatatctgtctccagtgat
gcactgaagcgtgctaggagccttcttggtgacccggagttgggaactttcttgaatgag
gaggatgcagatgattcacttttttcattttcagaggccagattcaatgatattttgtca
aatgagggaaatgatccttgcactcccttttattgcgaggaaatggcaaacaacaaaaat
tcgtcaaaaagttttgtaaccccgttgcgatcatcttctaatcaagtgcagttatcagtc
aagtcagaacatattatttcagggaataacttgatcaaagaatttgatgctgttcattat
gacagtgtttgtaggttaaatactaatgcatcttctctagagaagcgtctaagcgacagg
caaggtgatcctaatacagcagcaaaaagttctttggctaatggtgtcagttcaaggatt
agtccacttggacggtcaccagccagaccattggttgatatttcaaataccattggcaca
gtttgcaaaaataacggacaaatagctaatgtaaagagaatacttggaaagagttctgct
tctccgttcaaaaagccccgcagttccaaattctccactccgttgaataagaatgttcca
ttagttcctaatggtttatctactctaccatctgaacactcaagttgcagaaagagaatt
tcctcacgatacccgtttcagattccaagaatgtatgtcaaggaatattttaaagcacca
ccattacaccagaatacgttggagcttttgtcagaccaggtcagatgcatcacatcaacc
aatgcagaaaagtacatgtttcatgacgagtctggcttaaattgcattggaccagaagct
tttttccacatattggctcagtctggagcatccatgcaatatgcttcaaaagagtgggtc
ataaatcactacaagtggattgtttggaaactagcatgctatgagagaagctatcccact
aaagctgctggaaagtttttgacagtgtccaatgtgctcgaggaattgaagtatagatat
gaaagagaagtcaatcatggccaccgttcttcaatcaagagaattctggaaggggacgca
tcaccttcttcaatgatagttctatgcatttcagctatttgctcaaattgtgacctaaag
actgagacttcttccatggcagcaattggggatgaatgtagtagtacaacaaaagttgaa
ctaactgacgggtggtatgcaatggatgctgttttggatgtaccactgtcgaagcacctt
gctgctggaaaactgtatgtgggacagaaacttcggatctggggagcaggattatgtggc
tgggttgggcctgtttcaccccttgaggtgtcaaggacagttagtttgctattgcatgga
aatgggacatatcgagctcattgggctgatcgactgggattctgtaaaggtgttggttct
cctttagcatttaggtgcattaagtgtaatgggggtccagtcccccggaccttagttgga
gtcagacggatataccctgtcctctataaagagaggttaggcaatggagggtctattgtg
agatcagagaggatggagagtaaaatggtgcaattgtacaatcaaaggcgagctactgtt
gtagaaggcatcatttccgagtttcaaagagacataaaaggttcacatgattttgatgac
aatgatagtgaagaaggagcaaaaattttaaagatacttgagacagctgcagaacctgaa
gtattaatggcagagatgagtccggagcaactaacatcttttaccacttatcaagcaaaa
ctagaggcaaccaggcaggcaaacacggacaaagcaattgagaaagctttggaagctgct
ggcttaggtgagagagaagtcaccccatttatgagggtgaggatagttggattaactaag
aaaatctgtcatggaatggacagccctaaggaaggcttgataacaatctggaacccaaca
gagaagcagcaacatgagctggttgaggggcaggcttatggtattgctggacttgtgccg
tttaattctgatgcagataccctatacttgcaagcaagaggatccactaccaaatggcgg
cctttatcttcccaagcaactgaacactttaagccatttcacaatcctcgcaaatcagtc
ttattgtcaaatttgggtgaagttcctctttccagcgaatttgatatagctgccgtcgtt
gtgcatgtgggggaggtttttacagctcctcaccaaaagaaacagtgggtgtttgtgaca
gatggctccatttccgagtcacagtcagaagacttatccaattctttacttgccatccgc
ttctgcactccatacattaatgatggttcgtttgcacccatcaactctaatcttgcggga
tccactgtttgcttctgtaatcttatcaagagagcgaaggaccaattgaatcatctttgg
gtagcagaagctacagagaattcaatctactttctgaattctgatcctccccattgtgct
cacctcaaaaatgcagctgcctttgctcaaagatgggcacagatctctagcttgactatt
gataagcttagggagaaagttttatttattattggtgattgtaaaagctag
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