Campylobacter avium: CAV_0003
Help
Entry
CAV_0003 CDS
T05533
Symbol
gyrB
Name
(GenBank) DNA gyrase, subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cavi
Campylobacter avium
Brite
KEGG Orthology (KO) [BR:
cavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cavi03032
]
CAV_0003 (gyrB)
03400 DNA repair and recombination proteins [BR:
cavi03400
]
CAV_0003 (gyrB)
Enzymes [BR:
cavi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CAV_0003 (gyrB)
DNA replication proteins [BR:
cavi03032
]
Prokaryotic type
DNA Topoisomerases
CAV_0003 (gyrB)
DNA repair and recombination proteins [BR:
cavi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CAV_0003 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
VWA
Motif
Other DBs
NCBI-ProteinID:
ASQ29692
UniProt:
A0A222MVJ8
LinkDB
All DBs
Position
2533..4857
Genome browser
AA seq
774 aa
AA seq
DB search
MQENNKNYGESNIKVLKGLEAVRKRPGMYIGDTNISGLHHMIYEVVDNSIDESMAGYCDN
IEIELTDEGSCIVRDNGRGIPVGIHPTEGIPTLTVVLTVLHAGGKFDKDTYKVSGGLHGV
GVSVVNALSTKLIATVKRDGNIYRQEFEKGKAVSELEVIGKTEERGTIIEFWPDDSIFEI
TKFDYEILAKRFKELAYLNPKISIKFKDNRIAKEELFHFDGGIAQFVEDINKNKQALTKV
IYFSKHEDDVEVDIALLYNETYSENLLSFVNNIKTPDGGTHEAGFRMALTRVITNYIDAN
ANSREKDSKIVGDDIREGLIAIVSVKVPEPQFEGQTKGKLGSSYVKPIVSKVSYEYLSKY
FEENPNEAKAIMNKALMAARGREAAKRARELTRKKDSLSVGTLPGKLADCQSKNPSESEI
YLVEGDSAGGSAKQGRERSFQAILPLRGKILNVEKARLEKILKSEQIQNMITAFGCGISE
DFDIEKLRYHKIIIMTDADVDGSHIQTLLLTFFFRFMKELVVNGHIYLAQPPLYRYKKGQ
KREIYLKDERALNDYLIETGIESSNYEGIGLNDLKDFLKIVSAYRTVLKELENRFNVISV
IRYLIENEDLLKLSNEDLFEKIKIFLEKDGHNILNSYINENELRLFIQTNNGLEELLIND
DLFSNALFEEGIYIYKKIKERELNFNKDILEILDEVEKNARKGAYIQRYKGLGEMNPEQL
WETTMDPSNRRLLKITIEDAIRANDTFNLFMGDEVEPRREYIQAHAKDVKHLDV
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagaacaacaaaaactacggcgaaagtaatataaaagttctaaaaggcctagaa
gcagttagaaaaagaccggggatgtatattggtgatactaatataagcggtcttcatcat
atgatttacgaagtagttgataactccatagatgagtcgatggcaggatactgcgataac
atagaaatagaactcacagatgagggaagctgtatagtaagggataacggtagaggaatt
cctgttggaattcacccaactgagggcatacctaccttaactgttgttttaaccgtactt
cacgccggaggaaaatttgacaaagatacttacaaggtttctggagggcttcacggtgtg
ggtgtttctgttgtaaatgcactttcaaccaaattaatagcaactgttaaaagagacgga
aacatttatagacaagaatttgaaaaaggcaaggctgtaagtgagcttgaagtaatagga
aaaaccgaggaaagaggcactataatagaattttggcctgatgatagtatttttgaaata
actaaatttgattatgaaattttggctaaaagatttaaagaactagcgtatctaaaccca
aaaataagcataaaattcaaagataacaggatagctaaagaggagcttttccattttgac
ggcggaatagcgcagtttgtggaggacataaacaaaaacaaacaagctcttacaaaggtg
atttatttttccaagcatgaagatgatgtagaagttgatatagccttgctttacaacgaa
acttatagcgaaaatttgctttcttttgttaataatatcaaaaccccggatggaggaact
catgaggctggttttagaatggccttaacgagggttataacaaactacatagatgcaaat
gcaaattcaagggaaaaagatagcaagatagttggcgatgatataagagaggggctcatc
gcaatagtaagcgtgaaggttcctgagccgcagtttgagggacaaactaagggaaaactt
ggctcatcttatgtaaaaccgatagtttcaaaagtaagttatgaatatttaagtaaatac
tttgaagaaaatccaaacgaagccaaggccataatgaataaggccttaatggcagcaaga
ggtagagaagctgcaaaaagggcaagagagcttactaggaaaaaagatagcttaagcgtt
ggaaccttgcctggaaagttagcggactgtcaaagtaaaaatccaagtgaaagcgaaatt
tatctagttgaaggtgactcagcaggtggttctgcgaagcaaggcagggaaaggagcttt
caagccatcttgccacttaggggtaaaattttaaatgttgaaaaggcaagattagaaaag
attttaaaatcagagcaaattcaaaacatgataacagcttttggctgcggcataagcgag
gattttgacatagaaaaattaagataccataaaatcatcataatgacggatgctgatgtt
gacggctctcacatacagacattgttattaacctttttcttccgcttcatgaaagaactt
gttgtaaatggtcatatctatctagcccagcccccgctttacagatataaaaagggtcaa
aaaagagaaatttacctaaaagatgaaagggctttgaatgattatttgatagaaaccggc
attgaaagctcaaattacgagggcatagggcttaacgacttaaaagactttttaaagata
gtgtctgcttacaggacggttttaaaagaacttgaaaataggtttaatgtcatttctgtt
attagatacttgatagaaaatgaggatttgttaaaactttctaacgaggatttgtttgaa
aagataaagatttttcttgaaaaagacgggcataatatcttaaattcatacataaatgaa
aatgaacttcgcttgtttatacagacaaataacggacttgaggagctcttgataaatgat
gatttgttctcaaatgcactttttgaggaaggaatttacatatataaaaagattaaagaa
agagagttaaatttcaacaaagacatcttagaaattctagatgaggttgaaaaaaatgcc
agaaaaggtgcttatatacaaagatacaaggggcttggtgagatgaaccctgaacaactt
tgggaaactacaatggaccctagcaatcgtcgcttgcttaaaatcaccatagaagatgct
atccgtgcaaatgatacctttaatcttttcatgggagatgaggtagaaccaagacgcgag
tacatacaagcacacgcaaaagacgtcaaacacttagatgtataa
DBGET
integrated database retrieval system
