KEGG   Campylobacter avium: CAV_0244
Entry
CAV_0244          CDS       T05533                                 
Symbol
fliA
Name
(GenBank) RNA polymerase sigma28 factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
cavi  Campylobacter avium
Pathway
cavi02020  Two-component system
cavi02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cavi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CAV_0244 (fliA)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CAV_0244 (fliA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cavi03021]
    CAV_0244 (fliA)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:cavi02035]
    CAV_0244 (fliA)
Transcription machinery [BR:cavi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CAV_0244 (fliA)
Bacterial motility proteins [BR:cavi02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    CAV_0244 (fliA)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 UPF0122 HTH_23 GerE HTH_24 MarR DUF1376 MC7 TrmB UPF0175 HTH_5 Lentiviral_Tat MarR_2 HTH_WhiA Sigma70_ECF CC2-LZ
Other DBs
NCBI-ProteinID: ASQ29916
UniProt: A0A222MW95
LinkDB
Position
complement(235287..235991)
AA seq 234 aa
MLKSAQPPNVYAQAIKKEQDELVIAYMPALRAMAFRLKERLPSSIDVNDLISIGVEEMIK
LSRKYDKEQNDSFWGYVKKRVNGAMLDYLRSLDVLSRNNRKIVKELDLLIDEYYQEHECE
PDDEYLAKALNLDIDKIKEARIALEISYVLPLEEQINCYCEDSTLDRIERESLLEKVSEV
LSQLKEREQLIVQLYYYEELSLKEISEILDISESRISQIHKKLLKKLRERLTSG
NT seq 705 nt   +upstreamnt  +downstreamnt
atgctaaaaagcgcccagccgcctaatgtctacgcacaggctattaaaaaagaacaagat
gaacttgtaatagcttatatgccagcccttagggctatggcttttagactaaaagaaagg
ttgccctcaagcatagatgtaaatgacctcataagcattggcgttgaggagatgataaag
ctatcaagaaaatacgataaggaacaaaacgatagcttttggggctatgtcaaaaaacgc
gtaaatggggctatgcttgattatttgcgtagtcttgatgtcttaagtagaaataataga
aagattgtaaaagagctggatttactcatagatgagtactaccaagagcatgagtgcgag
cctgatgacgagtatttggccaaggctttaaatttagacatagacaagattaaagaagca
cgcatagcacttgagataagctatgtcctgccattagaggagcagattaactgctactgc
gaggactctacgctagataggatagaaagagaaagcctcttagaaaaggtaagcgaggtt
ttatctcagttaaaagaaagggagcagctcatcgtgcagctgtattactacgaggaatta
agcttaaaagagataagcgaaattttagacataagcgaatctagaatttctcaaattcac
aaaaaattgcttaaaaaacttagagaaaggctaacaagtggctga

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