Campylobacter avium: CAV_0268
Help
Entry
CAV_0268 CDS
T05533
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cavi
Campylobacter avium
Pathway
cavi03030
DNA replication
cavi03430
Mismatch repair
cavi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CAV_0268 (dnaE)
03430 Mismatch repair
CAV_0268 (dnaE)
03440 Homologous recombination
CAV_0268 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cavi03032
]
CAV_0268 (dnaE)
03400 DNA repair and recombination proteins [BR:
cavi03400
]
CAV_0268 (dnaE)
Enzymes [BR:
cavi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CAV_0268 (dnaE)
DNA replication proteins [BR:
cavi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CAV_0268 (dnaE)
DNA repair and recombination proteins [BR:
cavi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CAV_0268 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
PIN_9
Motif
Other DBs
NCBI-ProteinID:
ASQ29939
UniProt:
A0A222MVK7
LinkDB
All DBs
Position
complement(252544..256122)
Genome browser
AA seq
1192 aa
AA seq
DB search
MAFTHLHLHTEYSLLDGANKLKELAKTLQQQGVTSVAMTDHGNMFGAIDFYKTMKQHNIK
PIIGLEAYLHNADDISDKSSRQRFHICLFAKNQKGYENLMYLSSQSYIKGLYYYPRINKK
ILEEHNEGLICSSACLQGEVNWHLNTENERNVKFGAKGYEAAKEAALWYKSVFKDDFYLE
IMRHGIKDQRYIDDLVLRLAKELDIKIIATNDTHYTFKERAAAHEVLMCINTGVKLDDPN
RLRHSVHEFYVKSPEQMQELFLDIPEAISNTQEIANKCDLELKLGNPTPPNFKFTREYAK
SFDLELKEDKEFSFENDDIVFEYLCKKGLDERLLYIDEQKHEEYKQRLQREIEVIKNMKF
SGYMLIVQDFIAVAKSKGIPVGPGRGSAAGSLVAYALKITDIDPLPYSLLFERFLNPERV
SMPDIDVDFCQDRRDEVIDYVIEKYGYDKVAQVITFGKMLAKGVIRDVARVCGVSLSDAD
ELAKLVPNELNITLEKAYNTEPKIAEFIQNHSKGKELWEFSLALEGLNRNAGVHAAGLVI
SNEALWKKTPLFRPAKNDEKHLVTQYSKDFLEDIDLIKFDFLGLKTLTVIDNAVKLIKQR
YDKDIIWEKIDINDEKVYKTIQSGNTLGIFQIESDGMQALNSRLKPDRFEDLIAVLALYR
PGPLESGMVDDYIDVKHGRKEAKYAFKELEPILKDTYGVIVYQEQVMQIVQEIGGFSLGG
ADNVRRAMGKKKREILDNLKNQYLEGAKNKGYDVKKADDLFELILKFAEYGFNKSHSAAY
ALISFQTAYLKTYYPSEFMAALLTSEQNKVEKVAQYLDELKRMDIELLPPSINSARGEFV
AINKDGKEAIVYGLAAIKSVGMPAVNNLLSVRGEGFKSMDDFIKKIDPAKINKRTMEHLI
KVGAFDEFGYTRKCLMDNIEQICETSRKIAEIKRNEQGSIFGIDEITDCIKLDFKADDEE
FSLKEKLEFEKEIIGSYLFAHPLDEYKDEILKFDYYKSVDFDNLKGNGSITCIGKIEEFK
SFMSKSGKRYAKMKILDFYSNFDLVVFEKNVAMLEELVNDELKKDKPYAFVINYRKDESE
FSLMFQELVELEQLADRNLKAKTTYRSKKENNFTKEAKEFEKMILEIDLSLLNKEIIYEI
HELARSSHNPSNESNKKLVLKVRTVDSCLVYNTSFIVPEQLKEEISKKAKVS
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggcttttacacatctgcatttacatactgaatattctttgctagacggtgctaataaa
ctcaaagagctagctaaaaccctgcaacaacaaggtgtaacaagcgttgctatgacagac
catggaaatatgtttggtgctattgatttttacaagactatgaaacaacacaacattaag
cccataataggacttgaggcctacttgcacaacgctgatgacatatccgataaaagctct
aggcagagatttcacatctgcttgtttgctaaaaatcaaaaaggttatgaaaatttgatg
tatctaagctctcaaagctacataaaagggctttattactatcctcgtataaataaaaaa
atccttgaagaacacaacgaagggctcatttgctcctcggcttgtttgcaaggtgaggtg
aattggcacctaaatacagaaaatgaaagaaatgtaaaatttggcgcaaagggctatgaa
gccgcgaaagaagctgccttgtggtataagtctgtttttaaggatgatttttatcttgaa
ataatgaggcacggcataaaggaccaaagatatatagatgatttggtattgcgtcttgca
aaggaacttgatataaaaatcatagccactaatgacactcactacacattcaaagaaaga
gccgctgcacacgaggttttaatgtgtataaacacaggcgtaaagcttgatgacccaaac
agactaaggcacagcgttcatgaattttatgtaaaaagccctgagcaaatgcaagaattg
tttttagacataccagaagccatttccaacacgcaagaaatagcgaataaatgcgattta
gaactaaagcttggcaacccaaccccgccaaatttcaaatttacaagagaatatgccaag
agctttgatttagagctaaaagaggataaagaatttagctttgaaaacgatgatatagtc
tttgagtacctttgcaaaaaagggcttgatgaaagacttttatatatagatgagcaaaag
catgaggaatacaaacaaagactgcaaagagaaatcgaagtaattaaaaatatgaaattc
tcgggctacatgcttatcgtgcaagactttatcgctgttgctaagtcaaagggaattcct
gttgggcctggtcgtggttcagccgctggttctttggtggcttatgccctaaagataacc
gacatagaccctctgccctactctttactttttgaaagatttttaaatcctgagcgcgtt
tcaatgcctgatattgatgtggatttttgccaggatagacgcgatgaggtgattgattat
gttatcgaaaaatacggctatgacaaggtggctcaggttataacctttggtaaaatgctt
gcaaagggcgttataagggatgtagctagggtttgcggggtaagtcttagtgatgctgat
gagttggcaaagcttgtgccaaacgaactaaatatcacgcttgaaaaagcctataacaca
gaacctaaaatagctgaatttatacaaaatcactcaaaaggcaaggagttgtgggaattt
tctctagcacttgaagggcttaacagaaacgccggagttcatgctgctggccttgttata
tcaaatgaggctttatggaaaaaaacccctctttttaggcctgctaaaaatgatgaaaaa
caccttgtaactcagtattctaaagactttttggaagacattgacctgataaaatttgac
ttcttggggcttaaaaccttaacggttattgataatgccgtaaaactcataaaacaaaga
tacgataaggatataatctgggaaaagatagatataaacgatgaaaaggtgtataagacc
atacaaagcggcaatactcttgggatatttcaaatagaatcagacggcatgcaagcctta
aattcacgcttaaagcctgatagatttgaagatcttatagctgttttggcactttataga
cctggacctcttgaaagcggtatggttgatgactacatagatgtaaaacatggacgaaaa
gaagctaaatacgcctttaaagagcttgagcctatactgaaagacacttacggcgtgata
gtttatcaagaacaagttatgcaaatcgtgcaggaaataggaggcttttctttaggcggt
gcagacaatgtaagaagggctatgggtaagaaaaaaagagaaattctagataatcttaaa
aatcaatacctagaaggcgctaaaaacaagggctatgatgtaaaaaaagcagatgatttg
tttgaattgattttaaaatttgcagaatatggctttaacaaatcccactcggcagcctat
gctttaatatcctttcaaaccgcgtatttaaaaacctactatcctagcgaattcatggca
gcacttttaacaagcgaacaaaataaagtagaaaaagttgcgcagtatctagatgagctt
aaaagaatggatatagagcttttgccgcctagcattaactcggctagaggtgaatttgtc
gctataaacaaggacggaaaagaagccattgtgtatgggcttgcagctataaagagtgtt
ggaatgccagcagttaataatcttttaagcgtaaggggcgagggctttaagagtatggat
gattttatcaaaaaaatagacccagccaaaatcaacaaacgcacaatggaacatctaata
aaagtgggagcctttgatgaatttggatacacaagaaaatgcttgatggacaatatagaa
caaatttgcgagacctcaagaaagatagcagaaataaaaagaaacgagcaaggctctatc
tttggcattgatgagataaccgactgcataaagcttgattttaaagcagatgatgaggaa
tttagcttaaaagaaaagcttgaatttgaaaaggaaatcatcggctcatacctttttgca
cacccgctagatgagtataaagatgaaattttaaaatttgattattataaaagtgtagat
tttgataacttaaagggtaacggctctataacttgcataggcaagatagaggaatttaaa
tcctttatgagtaaaagcggaaaaaggtatgccaagatgaaaatcttggacttttactcg
aattttgatttggtggtttttgaaaaaaatgtggccatgcttgaggaacttgtaaatgat
gagcttaaaaaagataagccttatgcctttgttataaactacagaaaggatgagagtgaa
tttagcttgatgtttcaagagcttgtagagctagagcagctagctgatagaaatttaaaa
gctaaaacaacatacagaagcaaaaaagaaaataatttcacaaaagaagccaaggaattt
gaaaaaatgatcttagaaatagacctttccttgctaaataaagaaatcatctatgaaatt
cacgagctagcaagaagctcgcacaaccctagcaatgaaagcaacaaaaagcttgtctta
aaggttcgcactgtggattcttgtttggtttataatacaagctttatcgttccagagcag
ctaaaagaagaaatttcaaaaaaggcaaaagtaagctga
DBGET
integrated database retrieval system
