Campylobacter avium: CAV_0480
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Entry
CAV_0480 CDS
T05533
Symbol
trmA
Name
(GenBank) tRNA m5U54 methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
cavi
Campylobacter avium
Brite
KEGG Orthology (KO) [BR:
cavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cavi03016
]
CAV_0480 (trmA)
Enzymes [BR:
cavi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
CAV_0480 (trmA)
Transfer RNA biogenesis [BR:
cavi03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
CAV_0480 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_15
Methyltransf_25
Methyltransf_31
MTS
Methyltransf_11
RrnaAD
DREV
Methyltransf_12
RNase_3_N
TRM5-TYW2_MTfase
DUF7700
Methyltransf_4
CTE_SPB4
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
ASQ30146
UniProt:
A0A222MX64
LinkDB
All DBs
Position
complement(467860..468897)
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AA seq
345 aa
AA seq
DB search
MNLDEKSSYLKELFKDFTFDFVSFASNTKSYRNKLELAIFHQDDEIHYAMFEGKKKYIVK
ECKIANEKIQDLMPLVLKALNSNKALKERLFGVEFLSTKLDMSLTLLYHKDIEQIKTELN
KFSESLNLKLIARSRGKKLVFKDEILKQELEIYNKKYHYVYTNECFCQANTYINEKMIEW
LLKELKDEKKRDLLELYCGYGNFTLPLSFIFERVVATELSKKNIEFALKNCELNGVKNIK
FLRLSSEDFSKAIKKEREFFRLRDVNLDEFYFSHILLDPPRAGLSKEVVTLAKNYENIIY
ISCNPQSLRQNLEHLKEYELKKLALFDQFVDTKHIECIAILKRKV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcttgatgaaaaaagctcttatttaaaggagcttttcaaggattttacctttgac
ttcgtaagctttgcttcaaacacgaagtcttacaggaacaagcttgagcttgctatcttt
catcaagatgatgaaattcactacgctatgtttgagggcaaaaaaaagtatatagtaaaa
gaatgcaagatagcaaatgaaaagatacaagatttgatgccccttgtcttaaaggcttta
aactcaaacaaagccttaaaagaaaggctttttggagtggagtttttaagcacgaagctt
gatatgagccttactttgctttatcacaaggacatagagcaaatcaaaacagaactaaat
aaatttagcgaaagcttaaatttaaaactcatagcaagaagcaggggcaaaaagctagtt
tttaaagatgaaattttaaaacaagagctagaaatttataataaaaaatatcattatgta
tatactaatgagtgcttttgtcaagcaaatacttatataaatgaaaagatgatagaatgg
cttttaaaagagctaaaagatgagaaaaaaagagatctcttagagctttactgcgggtat
gggaattttaccctgcccctatcttttatctttgaaagggtagtagcaaccgagctatcc
aaaaaaaatatagaattcgcacttaaaaactgcgagttaaatggtgttaaaaatatcaaa
ttcttaaggctttcaagtgaggatttttcaaaggctataaaaaaagaaagagaatttttt
aggctaagagatgtaaatttagatgagttttatttttctcatatcctgcttgatccacca
agggctgggcttagcaaagaggttgtaactttagctaaaaactatgaaaatatcatctat
atatcttgcaatccgcaaagtttaaggcaaaatttagagcatttaaaagaatatgagctt
aaaaaactagcactttttgatcaattcgtagatacaaagcacatagagtgcatagccata
ctaaaaagaaaggtttaa
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