Campylobacter avium: CAV_0600
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Entry
CAV_0600 CDS
T05533
Symbol
uvrB
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
cavi
Campylobacter avium
Pathway
cavi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CAV_0600 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cavi03400
]
CAV_0600 (uvrB)
DNA repair and recombination proteins [BR:
cavi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAV_0600 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CAV_0600 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
SWI2_SNF2
AAA_30
Kinesin
UB2H
DUF3873
DUF87
Motif
Other DBs
NCBI-ProteinID:
ASQ30267
UniProt:
A0A222MW32
LinkDB
All DBs
Position
576758..578731
Genome browser
AA seq
657 aa
AA seq
DB search
MFSLKSEFSPSFDQQNAIDKIVKSIKEGNKYQTLLGVTGSGKTFTMANVIQSLAMPTLVM
SHNKSLCAQLYSEFKGFFPSDYVEYFISYYDYYQPEAYIPRTDVFIEKDSSVNEDLERLR
LSATASLLSYDNVVCIASVSANYGLGNPNEYVGMVLIFELGMQISQKELLKKLVDMGYKR
NDAYFDRADFRVSGDIVDIFPAYYEDEVIRLEFFGDELEKMYHYNIFENKKIKDLKRFIL
YPTSQFSVGETRLKQAIKDIKEELAARLAYFENENKLVEYQRLKQRVEFDIEMLESTGMC
KGIENYARHLTGLKEGQTPYTMFDYFAINDRNFLVIVDESHVSLPQFRGMFAGDRSRKQT
LVDYGFRLPSALDNRPLMFDEFINKNCQFLFVSATPAALELELSKENVFEQIMRPTGLLD
PLIELKKLDNQVEVLFDEAKKVIARNERVLVTVLTKKMAEELSKYYIEMGIRVKYMHSDI
DAVERNELIRGLRTGAFDMLIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTSLIQTMG
RAARNVNGKVLLFANKITKSMKEAMDITNKRRELQMAYNKKHNITPKSVKRNLEDSLKNE
VNDAEIYRKSKKLEKMPASERAKLVKELRKQMLEAAKLLEFEKAAALRDEINKLRSL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtttaaaaagtgagttttctcctagttttgaccagcaaaatgccatagataag
atagtaaaaagtataaaagagggtaataaataccaaaccctcttaggagtaacaggaagt
ggaaaaacctttactatggcaaatgttatacaaagcttagctatgccaactctagtaatg
tctcataacaaaagcctttgtgcccagctttatagtgaatttaagggcttttttccaagt
gattatgtggagtattttatctcatattatgattattatcagccagaagcttatatacca
agaacagatgtttttatagaaaaggatagctccgtaaatgaggacttagaaaggcttaga
ctaagtgcaacggcttctttgttaagctatgataatgttgtttgcatagcctccgtgtct
gcaaattatggcttaggaaatccaaatgagtatgttggtatggttttaatctttgagctt
ggtatgcaaatttcacaaaaagagcttttaaaaaaacttgtggatatgggttataaaaga
aatgatgcttattttgatagggctgattttagggtgagtggagatatagttgatattttt
ccagcttattatgaagatgaggtgataaggcttgagttttttggcgatgagcttgaaaag
atgtatcattacaatatttttgaaaataaaaagataaaggatttaaaaagatttattctt
tatccaacaagccagtttagcgtgggagaaacaaggcttaaacaggctattaaggacata
aaagaggaactagctgctagactagcttattttgaaaatgaaaataaacttgtggagtat
caaaggctaaagcaaagggttgaatttgatatagaaatgcttgaaagcacgggtatgtgt
aaaggtatagaaaactacgcaaggcatttaacgggcttaaaagaggggcaaactccttat
acgatgtttgattattttgctataaatgataggaactttcttgttatagttgatgaaagc
catgtttcattaccccagtttcgtggaatgtttgctggggatagaagtagaaagcaaact
ttggttgattatggttttcgcttgcctagtgctcttgataaccgccctttgatgtttgat
gagtttataaataaaaattgtcaatttctattcgtctccgccactccagcagctttggaa
cttgagcttagcaaagaaaatgtatttgagcaaattatgcgtccaacgggacttcttgac
cctcttatagagcttaaaaaacttgataatcaagttgaggttttatttgatgaggcgaaa
aaggttatagctagaaacgaaagagttttagtaacagtgcttactaaaaaaatggctgag
gaacttagcaaatactacatagaaatgggcataagggtaaagtatatgcactcagacatt
gacgctgtagaaagaaacgagcttattagggggcttagaacaggtgcttttgatatgtta
ataggcataaatttgctaagagaagggcttgatttgccagaagtttctttaatagccata
atggacgctgataaagagggctttttaagaagcaccacaagtcttatacaaactatgggt
agggctgctagaaatgtaaatggcaaggttttgctttttgcaaataaaataacaaagtct
atgaaagaagctatggatataactaataaaagaagagagcttcaaatggcttataataaa
aagcataatatcactccaaaatctgttaaaagaaatctcgaagatagccttaaaaatgag
gtaaatgacgctgaaatttatagaaagagcaaaaaactagaaaaaatgccagcaagtgaa
agggcaaagctagtaaaagagctaagaaaacaaatgcttgaggctgcgaaactccttgaa
tttgaaaaggctgctgccttaagagatgaaataaataagcttagaagcttgtga
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