KEGG   Campylobacter avium: CAV_0823
Entry
CAV_0823          CDS       T05533                                 
Name
(GenBank) type VI secretion system, ClpV1 family ATPase
  KO
K11907  type VI secretion system protein VasG
Organism
cavi  Campylobacter avium
Pathway
cavi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cavi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CAV_0823
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cavi02044]
    CAV_0823
Secretion system [BR:cavi02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CAV_0823
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 NBD_SMAX1 Sigma54_activat AAA_22 AAA_14 AAA_7 ATPase_2 nSTAND3 Clp_N AAA_24 NACHT TniB Zeta_toxin AAA_25 nSTAND1 T2SSE TsaE NTPase_1 nSTAND6 SLFN-g3_helicase ABC_tran DUF815 SRP54 DUF3050
Other DBs
NCBI-ProteinID: ASQ30487
UniProt: A0A222MWP2
LinkDB
Position
812954..815593
AA seq 879 aa
MAKIKRIHLFSKLNKTSYQSLESATILCKTRGNPYVEIVHFINQIIMSENTDFHQIISHF
ELDFSVLSKDLIKYLDSLPRGASSIQNFSNDIELLIQEAWIFSSIVFAVDKIRTGHILLA
LKQNKNLSSRLENMSEEFIKINADLLQENFLNITKDSIEANQDEKSSKLSTGQADKLLND
KGLSDALSLYTLDLTQRAKEGKIDEIVGRDEEIRKMIDILMRRRQNNPILTGEAGVGKTA
LVEGLAVKLAKDEVPSFLKGFKLLSLDMTLLQAGASMKGEFEERFKNLIQSIQNSDSKII
LFIDEAHSLIGAGGSAGQNDAANILKPALARGELRCIAATTWQEYTKYFEKDPALSRRFQ
NIAVDEPDDEKCIQMMRKMTSSLQDFHKVSISNEAIIASVKLTRRYLPTRKLPDKAMSIL
DTACARVALSQSSLPSNIENLIKEIEAKSLELELLQREEKEGFKHSEAIEKIKEDIKNLE
SKKAKLEDKFVKENELVAKYKSLREKILADEKEDLSSKEELKEILKDLYSLQEDDPMVLP
FVDEQAIALVISEYTGIPLGRMLNTELKNILNLKEELCKNVIGQDHSLELIAKRIITSRA
KLSDESKPQAIFMLAGPSGVGKTQTALSIAELVYGSENNIITINMSEFQEAHTVSSLKGA
PPGYVGYSEGGILTEAVRKKPYSVILLDEIEKAHKDVHELFFQVFDKGRMEDGAGKLVDF
RNTIIILTTNVGDEEIFNLCEDENNYPSAEILERAIREPMQKVFPPALLGRLVVVPYYPL
SKKNLYKIIDLKLKKIQDRIRQNYKAELSYNDSLKDELISRCDNSAFGARMIDSIINNEL
LPDLSMNFLNSVMQNKKISKLSISASDSKFEYVFEYKED
NT seq 2640 nt   +upstreamnt  +downstreamnt
atggctaagattaaaagaattcatcttttttcaaaattaaataaaacttcttatcagtcc
ttagaaagtgctactattttatgtaaaacaaggggcaatccttatgttgaaatagtgcat
tttataaatcagataataatgagcgaaaataccgattttcaccaaataatctctcatttt
gagcttgatttttctgttttatctaaggatcttattaaatatttagatagcttaccaaga
ggtgcttctagcatacaaaatttctcaaatgatatagagcttcttatacaagaagcttgg
atcttttcttctatagtctttgctgtggataagattagaacaggacatattttactagcc
ttaaagcaaaataaaaacctctcatcaaggcttgaaaatatgagtgaggaatttatcaag
ataaatgctgatttattgcaggaaaattttttaaatataacaaaggatagtatagaagct
aatcaagatgaaaaaagctcaaagctttctacaggacaggctgataagcttttaaatgat
aagggtctaagcgatgctttaagtctttatactcttgatttaacacaaagagcaaaagaa
ggcaagatagatgagatagtaggcagagatgaagagataagaaagatgatagatatctta
atgcgaagaaggcaaaataatcctatcctaacaggagaggcaggagttggaaaaacagct
cttgtggagggtttagctgtgaaacttgcaaaagatgaagtgcctagctttttaaagggc
tttaagcttttaagtctggatatgaccttacttcaggccggtgctagtatgaaaggagaa
tttgaagaaaggtttaaaaatcttatacaaagcattcaaaattcagattctaaaatcata
ctttttatagatgaggcacattctttaatcggtgctgggggtagtgcagggcaaaatgac
gctgctaatatcttaaaaccagcacttgcaagaggagaattaagatgtatagctgctact
acttggcaagaatatactaagtattttgaaaaagatccagccctttcaagacgttttcaa
aatatagctgtagatgagccagatgatgaaaaatgcatacagatgatgagaaaaatgacc
tcttctttgcaagattttcataaagttagtataagtaatgaggctataatagcaagtgtt
aagcttacaaggaggtatttaccaactagaaagctacctgataaggctatgagtatctta
gatacagcttgtgctagagtggcactttcgcaatcttccttgcctagcaatatagaaaat
cttataaaagagatagaggctaaaagcttagagcttgaacttttgcaaagagaggaaaaa
gagggctttaagcacagtgaagctatagaaaaaataaaagaggatataaaaaatttagaa
agtaaaaaggcaaagttagaggataaatttgttaaggaaaatgagcttgttgctaaatat
aagagcctaagagaaaaaattttagcagatgaaaaagaagacttaagctctaaagaagag
cttaaagaaattttaaaagatttatactccttgcaagaagatgatcctatggtgcttcct
tttgtagatgaacaagccatagcccttgtaatatcggaatacacaggaattccactaggc
aggatgttaaatactgagcttaaaaatatcttaaatttaaaagaagagctttgcaagaat
gttatagggcaagatcatagcctagagctaatagctaaaagaattatcacatcaagagct
aaattatcagatgagagcaaacctcaagctatctttatgttagctggaccttctggggtt
ggtaaaactcaaactgctttaagtatagcagaacttgtttatggtagcgaaaataacatc
ataactataaatatgagtgaattccaagaagcacacacggtatctagcttaaaaggagca
cctccgggctatgttgggtattcagagggtggaattttaacagaggctgttaggaaaaag
ccttatagcgttatcttgcttgatgagatagaaaaggcacataaggatgtgcatgagctt
ttctttcaagtctttgataagggtaggatggaagatggtgctggtaagcttgtggatttt
agaaataccattatcatacttactacaaatgtaggagatgaggaaatttttaatctttgc
gaggacgaaaataattacccaagtgcagaaattttagaaagagctataagagaacctatg
caaaaggtttttccaccagctttgcttggtaggcttgttgtagtgccttattatccacta
tcaaaaaagaatttatataagataatagatttaaaacttaaaaagatacaagataggata
cgccaaaattacaaggcagagctaagctataatgacagtctaaaagatgagcttatatca
aggtgtgataactcagcctttggtgctagaatgatagatagcattataaataatgagctt
ttgccagatcttagtatgaactttttaaatagcgttatgcaaaataaaaagataagtaag
cttagtataagcgcgagcgattctaagtttgagtatgtatttgagtataaggaggattaa

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