Campylobacter avium: CAV_1068
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Entry
CAV_1068 CDS
T05533
Symbol
truB
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cavi
Campylobacter avium
Brite
KEGG Orthology (KO) [BR:
cavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cavi03016
]
CAV_1068 (truB)
Enzymes [BR:
cavi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CAV_1068 (truB)
Transfer RNA biogenesis [BR:
cavi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CAV_1068 (truB)
Prokaryotic type
CAV_1068 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
Motif
Other DBs
NCBI-ProteinID:
ASQ30720
UniProt:
A0A222MYC1
LinkDB
All DBs
Position
complement(1055418..1056236)
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AA seq
272 aa
AA seq
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MNKLFVAYKPRDISSNDYLQRLKKRYKVEKAGYAGTLDPFAQGTLIVAFGSFTKLFRFLN
KAPKIYECTMWLGVKSLSLDDKNIQSIEKIKEVSKDEIESVKAKLLGELSFIPPAFSAKR
INGKRAYEFARKNEEVKLNSCIMNIYDCEILSYAHPFLSLRLTVSEGAYIRSYCELFAKE
LNINATLTHLKRIKEGAFVYENEKNLNILDYLCLKKNYIDDINKLENGSKLSLEDLKFKD
EAMYFIESDKYFSIIELKDSKISYILNKVSKC
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattatttgtagcctataaaccaagagatattagctcaaacgactacctgcaa
aggcttaagaaaagatacaaggttgaaaaggcaggttatgctggcacgcttgaccctttt
gctcaaggtactttgattgtggcttttggaagctttaccaagctttttcgctttttaaac
aaggctcctaaaatttatgaatgcactatgtggctgggcgtgaaatcccttagcctagat
gataaaaatatacaaagcatagaaaagataaaagaagttagcaaggatgagattgaaagt
gtgaaagcaaagcttttaggagagttaagcttcataccgcctgctttttcagcaaaaagg
ataaatggcaaaagagcttatgaatttgctagaaaaaatgaagaagtaaagctaaattct
tgcataatgaacatttacgactgtgaaattttatcttatgctcatccttttttgagttta
agattaacagttagtgagggtgcttatatacgctcttattgtgagctttttgcaaaggaa
ttaaatatcaacgcaacccttactcatcttaaaaggataaaagagggtgcttttgtgtat
gaaaatgagaaaaatttaaatatacttgattatctttgtttaaaaaaaaattatatagac
gatataaataaacttgaaaacggttcaaagcttagtttagaggacttgaaatttaaggat
gaggctatgtattttatcgagagtgataaatattttagtataattgagcttaaggactct
aagataagttatatattaaataaggttagcaaatgttga
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