Campylobacter avium: CAV_1069
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Entry
CAV_1069 CDS
T05533
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cavi
Campylobacter avium
Pathway
cavi03420
Nucleotide excision repair
cavi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CAV_1069
03430 Mismatch repair
CAV_1069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cavi03400
]
CAV_1069
Enzymes [BR:
cavi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CAV_1069
DNA repair and recombination proteins [BR:
cavi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAV_1069
MMR (mismatch excision repair)
Other MMR factors
CAV_1069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_12
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
ASQ30721
UniProt:
A0A222MXZ9
LinkDB
All DBs
Position
complement(1056233..1058281)
Genome browser
AA seq
682 aa
AA seq
DB search
MSIFSSLNEAQQQAASHIDGALLILAGAGSGKTKTITTRLAYLIGEVGIHPSNTLTLTFT
NKAAYTMRNRAFALLKNNTNYQPLLCTFHRFGLLFLKLHIEKLGFANNFKVIDSDDSKKI
VKDLIDSELKISPSLACDAISNFKNSLLTVDDAYNMLDENKKYIELGDVKIENEKLVKIY
KLYQDSLKKYAFLDFDDLLLLSYELLKKDENFAKEQSRLYNYITVDEYQDTNTLQLEILK
LLCKEHSNLCVVGDDDQSIYSWRGARIENILNFSKDFKDAKIIKLEHNYRSSAKILAAAN
ALISHNTQRHGKTLISTKEEGEDIRLLSFDDDRSEAFEIAQLVKKELALGTRASEIAILY
RRNILSSLIDNEFRKQKISYKVLSGIKFHERMEIKDAISYLRFISNTDDDYSFLRIINKP
KRGLGKAFIAKLQHHASLNKSSLFEAISYCVQNRLFTDELCKKLENFASSILSLQACELS
SIIDGLESVFALSACYDEDYKKENLKLLYNEMKAAIAKNNYTSLNDLLSDFSLQSEQDAM
SDDENCVYLMSVHASKGLEFDVVFIVGLENGNFPIHTSNEEERRLAYVAITRAKKRLYLS
RVEYRSAKSAMVEAPSIFLDELALKADVNKGDFKKGDLVKHKIFGIGRVLNVTKENAAQE
CKLDISFGGIQRSILSSFVTRI
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgagcattttttcttccttaaatgaggcccagcagcaggccgcctcgcacatagacgga
gctttgttaatccttgctggggcgggttctggcaagactaagactataactacaagatta
gcgtatttaataggtgaggttggaattcatccaagcaacaccctaacccttacctttaca
aacaaagctgcttataccatgagaaatagagcctttgccttgcttaaaaacaacacaaat
tatcagcctttgctttgcacttttcatagatttgggcttttgtttttaaagcttcatata
gaaaaattaggctttgctaataattttaaggtaattgatagcgatgatagcaagaaaatc
gttaaggatttgatagattctgagctaaaaataagtccaagtctagcctgtgacgcgatt
tcaaattttaaaaatagcttgcttaccgttgatgatgcttataatatgcttgatgaaaat
aaaaaatatatagaacttggcgatgtgaaaattgaaaatgaaaagcttgtaaaaatttat
aaactatatcaagatagtttgaaaaaatacgcttttttagattttgatgatttgttgctt
ttaagttatgagcttttgaaaaaagatgagaatttcgcaaaagagcaaagcaggctttat
aattacataactgttgatgagtatcaagacacaaataccttgcagcttgaaattttaaaa
ctgctttgcaaggagcattcaaatttatgcgttgtgggtgatgatgaccaaagcatttat
tcttggcgtggggcaaggatagaaaatatcttaaatttcagcaaggattttaaggacgca
aagattataaaactagagcataattaccgctcaagtgctaaaattttagccgctgcgaat
gctttgatttcgcacaatacccaaaggcacggcaagacactaattagcaccaaagaggag
ggcgaggatataaggcttttatcttttgatgatgatagaagcgaagcctttgaaatcgca
cagcttgttaaaaaggaattagctcttggaaccagggctagtgagatagctattttatac
cgcagaaatatactatcaagccttatagataatgaatttagaaagcaaaaaatatcttat
aaggttctaagtggtattaaatttcacgaaagaatggagataaaagacgctatttcttat
cttagatttatatcaaacacagatgatgattattctttcttgcgcataattaacaagcca
aagcgaggtcttggcaaggcctttattgctaaattacaacaccatgcttccttaaacaaa
agttctttatttgaggctatttcttactgcgtgcaaaaccgactttttacggatgagctg
tgcaagaagctagaaaactttgcctctagtattttgtccttgcaagcttgcgaactaagt
tccatcatagacggcttagaaagtgtttttgccttatctgcttgttatgatgaggattat
aaaaaagagaatttaaaactgctatataatgaaatgaaagcggccatagctaagaataat
tacacaagtttaaatgatttgcttagtgatttttccttgcaaagtgagcaagatgctatg
agcgatgatgaaaactgcgtgtatcttatgagcgtgcatgcgagcaaggggcttgaattt
gatgttgtctttatcgtaggtcttgagaatggaaatttccccatacatactagcaatgaa
gaggagagaaggcttgcttatgtggccataacaagggctaaaaaaaggctttatttaagc
agggttgaatacagaagcgccaaaagtgctatggtggaagcccctagtatatttttggat
gaattggctttaaaggctgatgttaataaaggggattttaaaaagggcgatttggtgaaa
cataaaatttttggcataggtagagttttaaatgtaacaaaagaaaatgccgctcaagaa
tgcaaactagacataagctttggcggcattcaaagaagcattttatcctcctttgtaacg
agaatatga
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