Campylobacter avium: CAV_1478
Help
Entry
CAV_1478 CDS
T05533
Symbol
truD
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cavi
Campylobacter avium
Brite
KEGG Orthology (KO) [BR:
cavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cavi03016
]
CAV_1478 (truD)
Enzymes [BR:
cavi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CAV_1478 (truD)
Transfer RNA biogenesis [BR:
cavi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CAV_1478 (truD)
Prokaryotic type
CAV_1478 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ASQ31088
UniProt:
A0A222MZC4
LinkDB
All DBs
Position
1488985..1490094
Genome browser
AA seq
369 aa
AA seq
DB search
MDENITFKKILSLSHEKIEAHFSKNSSDFVVRERALYEFSGKGEHLILHICKKDLSTKEA
LKILSEFSGAKIKDFGYAGLKDKQGLTFQYLSLARKFEEKLKNFSHEKLKILDIFYHDNK
LKIGHLKGNSFFIRLKKVNKINALKLEQAFALLCKQGFANYFAYQRFGKFNDNYKQGLEI
LQGKKKLRDKKMRDFLLSSFQSILFNAYLSKRLELSHFAKKFSKKEFASIYTLDKKDIDE
IYAQEHFFKLLRGDVLCHYPFGKNFFCEDVAKESERFEQKDISVTGLLLGERAMKAKDFA
LCLEDEIFKNFYLFNPALNGSRRFLWSYLEEAKFKYDEEKAQVSLEFFLQKGSYATTILE
ELLHTSNSD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaacatcacttttaaaaaaattttaagcctaagccacgaaaaaatagaggct
cattttagtaaaaacagctctgatttcgtggtaagagaaagagccttgtatgagtttagc
ggcaagggagagcacttaatacttcacatctgtaaaaaagacttaagcacgaaagaagca
cttaaaattttaagtgagtttagcggagcaaaaataaaggattttggttatgcaggactt
aaagacaagcaaggacttacttttcaatacctttctttagcgagaaaattcgaggaaaaa
ttaaaaaatttttctcacgaaaaacttaaaattttagacatcttctatcacgataataag
ctaaaaataggacatttaaaaggaaattccttttttataaggctaaaaaaagtaaataaa
atcaatgctcttaagctagaacaagcctttgctttgctttgtaagcaaggttttgcgaat
tattttgcttatcaaagatttggcaaatttaatgataattacaaacaagggcttgaaatt
ttgcaaggcaaaaaaaagctaagagataaaaaaatgagggattttttgctttcatccttt
caaagcatactttttaatgcctatcttagcaaaaggcttgagttgtcgcattttgcaaaa
aaatttagcaaaaaagaatttgctagtatatacacgctagacaaaaaagatattgatgaa
atttatgcacaagagcatttttttaagcttttaagaggcgatgtgctttgtcattatccc
tttggcaaaaacttcttttgcgaggatgtggctaaagaaagtgaaagatttgagcaaaaa
gatataagcgtaacaggacttttacttggagaaagagctatgaaagcaaaagattttgcc
ctatgcttagaagatgaaatttttaaaaatttttatctttttaatcctgctttaaatggc
tcaaggagatttttatggtcttatttagaagaggctaaattcaaatatgacgaggaaaaa
gctcaagtaagtctagagtttttcctacaaaagggctcttatgcaaccaccatcttagag
gagcttttacacactagcaacagcgattaa
DBGET
integrated database retrieval system
