Campylobacter avium: CAV_1670
Help
Entry
CAV_1670 CDS
T05533
Symbol
recJ
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cavi
Campylobacter avium
Pathway
cavi03410
Base excision repair
cavi03430
Mismatch repair
cavi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CAV_1670 (recJ)
03430 Mismatch repair
CAV_1670 (recJ)
03440 Homologous recombination
CAV_1670 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cavi03400
]
CAV_1670 (recJ)
DNA repair and recombination proteins [BR:
cavi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CAV_1670 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CAV_1670 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CAV_1670 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ASQ31266
UniProt:
A0A222N0A4
LinkDB
All DBs
Position
1671431..1673011
Genome browser
AA seq
526 aa
AA seq
DB search
MTMLDKEKIKEILSSRFKEDLHKNLADLPMPSCLKDIYKAANRIKEAIEQNEKVAIVGDY
DVDGVISCVILSEFFDDIAFDYVVKIPNRFKDGYGLNQNIIEELEDVSLIITVDNGISAF
EAAQLCLQKGIDLIITDHHCPPKILPQAFAIVNPKQADCKFPDIEICGAQVVWYLVAALK
QICKLKYDMSKFLDILTIAIIADMMELRDLNRALVKSGIEYINKSQRTAFRVLKEQYQKQ
KFELENISFLIAPLLNSAGRMDDATLSYEFLKSKKSTEAKELLSKIENFNELRKDEENKL
FNEALMQSDDKDSCVVVFKEDWHEGVLGIVASRLAKHFNKPSFVFSKNEGNIKGSARSVG
TVDILELIKTAENLLSNFGGHKGAAGLCLEDKNYESFKELINLECKKIPHRAFICNDDIL
GELSAFDVDFEILKILEHFEPFGYKNPKPFFIFKDLHVKHKKTMGDKEQHLKLILQDKNK
MVEALFFNFDKDVELNSKISFVASISKNEFRGLLTPQLIIRELIGA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgcttgataaggagaaaataaaagagattttatcgtctcgcttcaaggaggat
ttgcataaaaatttggccgatttgcctatgccctcttgcttaaaagatatttacaaggct
gctaataggataaaagaggccattgagcaaaatgaaaaagttgcgatagttggcgattac
gatgttgatggcgtgatttcttgcgttatacttagcgaatttttcgatgatatagccttt
gattatgtggtcaaaattccaaatcgcttcaaagacggctacggtttaaaccaaaacata
atagaagaacttgaggatgtatccttaatcataacagtagataatggcatatcagctttt
gaagccgcacagctttgtttgcaaaagggcatagacttaatcatcacagaccatcactgc
ccgcctaaaattctgccacaagcctttgctatagtaaatccaaagcaagcggattgcaaa
ttcccagatattgaaatttgcggtgctcaggttgtgtggtatttggttgcggccttaaaa
caaatttgtaaattaaaatacgacatgtctaaattcttagacattctaaccatagccatc
atagctgatatgatggagttaagggacttaaacagagccttggttaaaagcggcatagaa
tacataaacaaatcccaaagaacagcctttagggttttaaaagaacagtaccaaaagcaa
aaatttgagcttgaaaacataagttttttgatagctccactcttaaattcagcgggcaga
atggacgatgccactctttcttatgagtttttaaaaagcaaaaaaagcacagaggcaaaa
gagctgttaagcaagatagagaattttaacgagcttcgaaaagatgaggaaaacaagctt
ttcaacgaggccttaatgcaaagtgatgataaggactcttgcgttgtggtttttaaagag
gattggcatgagggcgttttaggcatagtggcctcaaggcttgctaagcattttaacaaa
cctagttttgtttttagcaaaaatgagggcaatatcaagggctctgcacgctctgttggc
actgtggatattttagaacttataaaaacagctgaaaatttgctgagtaattttggcgga
cacaaaggagctgccgggctttgtttggaggacaaaaactacgaaagctttaaagagctt
ataaatttagaatgtaagaaaattccacaccgtgcttttatatgcaatgacgacatttta
ggcgagctaagcgcctttgatgtggattttgagatacttaaaattctagaacattttgag
ccatttggatataaaaatccaaagcctttttttatctttaaagacttacatgtcaagcat
aaaaagactatgggcgataaagaacagcacctaaaacttatcctgcaagataaaaataaa
atggtggaagcgctgtttttcaacttcgataaagatgtggagctaaattcaaagataagc
tttgtagctagtatctcaaaaaatgaatttagagggcttttaacgccccagcttatcatt
agagagcttataggggcttag
DBGET
integrated database retrieval system
