Carnobacterium inhibens: Q783_04215
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Entry
Q783_04215 CDS
T02884
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
caw
Carnobacterium inhibens
Pathway
caw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
caw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Q783_04215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caw03400
]
Q783_04215
DNA repair and recombination proteins [BR:
caw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Q783_04215
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Q783_04215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_25
AAA_5
AAA_7
AAA
AAA_30
AAA_22
I_LWEQ
AAA_16
DUF87
Motif
Other DBs
NCBI-ProteinID:
AGY81499
UniProt:
U5S8A7
LinkDB
All DBs
Position
869410..871407
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AA seq
665 aa
AA seq
DB search
MPKDQFELVSKYQPGGDQPAAIKKLIEGIETGKKEQTLLGATGTGKTFTVSNVIKEVNKP
TLVIAHNKTLAGQLYGEFKEFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKESSVNDEI
DKLRHSATSSLLERRDVIVVASVSCIYGLVNPEDYRDHVLSLRVGAEINRDEMLRRLVDM
QFERNDIDFQRGRFRVRGDVVEIFLASRDSEAIRVEFFGDEIDRIREVDVLTGEVKADVQ
HVPIFPATHFVANDEQTRSAVQNIQEELEQRLKVLRAENKLIEAQRLEQRTNYDLEMLLE
MGYCSGIENYSRHMDGRKPGEAPYTLIDFFPDDFLIVIDESHITMSQIRGMYNGDRARKE
QLIEYGFRLPSALDNRPLRLEEFEKHVNQIMYISATPGPYELERAPEVIEQIIRPTGLLD
PIIEVRPIKGQIDDLIGEINERTEKNERVFITTLTKKMSEDLTDYLKEVGIKVAYLHSEI
KTLERTEILRDLRLGVYDVLIGINLLREGIDVPEVSLVIILDADKEGFLRSERSLVQTIG
RAARNENGKVIMYADRITDSMNAAITETERRRATQQEYNEEHGITPKTIIKDIRDLISIT
SVVEGDEEGASGLENIAKMTREQRLELIDGMEVEMRVAAKELNFEKAANLRDLILEITAQ
YKLKK
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggatcaatttgaattggtttctaagtaccaaccaggcggtgatcagcctgct
gcgataaaaaaattaattgaaggtatagaaacaggcaaaaaagaacaaactttactaggt
gccacaggaaccgggaaaacattcacggtatcaaatgttatcaaagaagtaaataaacct
actttggtcattgcacacaacaaaactttagctggtcagctgtatggggagtttaaggaa
ttctttcctaataatgcagttgaatattttgttagttattatgattattaccaaccagaa
gcttacgttccttcaagtgacacatttattgaaaaagagtcgagcgttaatgatgaaatc
gataaactacgccactctgcaactagttctttattagaacgacgagatgtgattgtagta
gcttccgtttcgtgtatttatgggctggttaaccccgaagattatcgagatcatgtcctc
tctctacgtgtaggggctgaaataaaccgtgacgaaatgttgcgtcgtttagtcgatatg
caattcgaacgaaatgatatcgattttcaacgtggacgttttcgtgttagaggagatgta
gttgaaatatttttagcatcgcgtgacagtgaagctatccgtgtagagttctttggagat
gaaatcgatcgtatcagagaagtagatgttttaacaggtgaagttaaagcagatgttcaa
catgttccgatttttccagcaactcactttgttgcaaatgatgaacaaacaaggtctgct
gttcaaaatattcaagaagagttagaacaacgcctaaaagttttacgtgctgaaaacaaa
ttgattgaagctcaacgtttagaacaacgcacgaactacgatttagaaatgttattggaa
atgggttattgctctggaattgaaaactattctcggcatatggatgggcgtaaacctgga
gaagcaccttatacattgattgacttctttccagatgattttttgatcgtaattgatgag
tcgcatattacaatgtctcaaattagaggaatgtataacggtgacagagctagaaaagaa
caattgattgaatatggtttcagattaccaagtgctttagacaatcgcccgctacgcttg
gaagaatttgagaaacatgtgaatcaaattatgtatatttcagctacacctggaccatat
gaattggagcgagctccagaggttattgaacaaattatccgtcctacaggattactagat
cctattatagaagtacgtccaatcaaaggacaaattgatgatttaattggtgaaataaat
gaacgcactgaaaaaaatgagcgtgtatttattactacattgactaaaaaaatgtcagaa
gatttaacagattacttgaaagaagtaggcattaaagttgcctatttgcatagtgagatc
aaaacacttgaacgaacagaaattcttcgagacttgcgtttaggtgtgtacgatgtactg
atcgggatcaacttgctacgtgaaggtattgatgtaccagaagtatctttagttattatc
ttagatgctgacaaagaaggtttcttaagaagtgaacgttcacttgtacagactattggt
cgcgctgcacgtaatgaaaatgggaaagtaatcatgtacgctgatcgaataacggattct
atgaatgccgccataacagaaacagaaaggcgtcgtgcaacgcaacaagaatacaatgaa
gaacatggtattactcctaaaacgattattaaagacattcgtgacttgatttctattact
tcagtagtagaaggagatgaagagggagcatctggattagagaatattgctaagatgact
agagagcagcgtttagaattaattgatggcatggaagtagaaatgagagttgcagcaaaa
gaattgaattttgaaaaagcggctaacttaagagatttgatattagaaataacagctcaa
tataaattaaaaaaatga
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