Corynebacterium atypicum: CATYP_02870
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Entry
CATYP_02870 CDS
T03227
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cax
Corynebacterium atypicum
Pathway
cax03420
Nucleotide excision repair
cax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CATYP_02870
03430 Mismatch repair
CATYP_02870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cax03400
]
CATYP_02870
Enzymes [BR:
cax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CATYP_02870
DNA repair and recombination proteins [BR:
cax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CATYP_02870
MMR (mismatch excision repair)
Other MMR factors
CATYP_02870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AIG63801
LinkDB
All DBs
Position
599854..603177
Genome browser
AA seq
1107 aa
AA seq
DB search
MTNPTARPEISARLLADLLSQPMPTDQQAAVIEAPPGPLLIVAGAGAGKTATMASRVVWL
VANGYCHPDEVLGLTFTRKAAQQLGKRIRDRLAQLAGSPKLAQVDPTGRLAEVLANAAPT
TATYDSYAGSLVSEYGLLLPVEPGARIIGDSEQFVIASEVVENYTGALETTYKVDTVIDY
LLRLEAELATQQADPQEVAAEAEAFVRLVQELPRGKRQKETINKKLVGWMDTQQLRAALL
ELVEQLHAEYDERQVSTFHAQMQQAARLASEHSAVGEAQRRKFRVVMLDEYQDTSHAQRV
LLRSLFGQGVDPELTVNAVGDPMQAIYSWRGATSNNLSAFVQDFSVDGVEPAPKAELTTS
FRNPKSVLAVANDVSAAVLGPAGSANRTVAALEPFGENAGEVEFSWFETAAEERAAIADH
LAEAYRKDKEAGERFTAAVLVRANAAAVPIYAELAARGVPAEIVSSSGLIDIPEVADLIA
VATMLARPADNAAALRVLTSPMVGLSLADVKALGARARTLAERAQPGAAPADENPAGSAE
DDARARLLAEIAQATPVDTDQLTGLADAVADPGEGEGLSSEGLTRIRRLNATLRQLRTSS
LHKALPELFADIELAMGLRTEVLAEADPNADGAPGVVHLDKFFDEVAAFGAVPGATLGQF
LDFLQVARDRERGLAPGEVTVRADRVQILTVHKAKGLEWRHVAVAHVMARGWEGKAETFL
TNVFKLPPGVGGDPDAAEDFTAGAAEDRREFEQLAGEYNEAEKAQQNEEAARLFYVAVTR
AEAGLWVSGASFTDTAQSQGKPFEPFAQLKNRFPDAVGYWFVPEDKAADGATDIPDAAAG
GDAEEPNDVLFPAVVPRPGARAAASEIGSLVAAGELPGLADDELSYQWEADVTALVEEQR
ALDAPVVEVVLGGRLTASDLVNLKRDPIAFARWLRRPVPFKPNSYAKRGTAFHAWLEDRF
AGASLLDEDQLPGLGEEEVDPARLSELKEKFLESEWAERTPMFVELPFEVLIGGRVVGGR
MDAVFFDEANDEWLIVDWKTGAPPKGAELRAAAIQLAVYRVAFLELLRVKGKEPKPVRAA
FHYVGHNFTLEPKDLAGYAELSAILEF
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgactaaccccaccgctcggccggagatctccgcgcgcctgctcgcagatcttctgagc
cagccgatgcccaccgatcagcaggccgccgtgatcgaggccccgcccgggccgctgctc
atcgtggccggagccggggccggcaagacagccacgatggcctcgcgcgtcgtctggctg
gtggccaacggttactgtcaccccgacgaggtattggggctcacgtttacccgcaaggcc
gcgcagcagctgggcaaacgcatccgggaccggctggcccagctcgccgggagccccaag
ctcgcccaggtcgaccccacgggcaggctcgccgaggtgcttgcgaacgcggccccgacg
accgcgacgtacgattcctacgcgggatcactggtgagcgagtacgggctgctgctcccg
gtggaaccgggcgcgcggatcatcggggatagcgagcaattcgttatcgcctccgaggta
gttgagaactacaccggggcgctagaaaccacctacaaagtcgacaccgtcatcgactac
ctcctccggctcgaagccgagctggccacccaacaagccgacccgcaggaggttgcagcc
gaggccgaggcgttcgtgcgcctcgtgcaggagctcccgcgcggcaaaaggcaaaaagag
accatcaacaaaaagctcgtcggctggatggacacccagcaactgcgtgcggcgctgctc
gaactcgtcgagcagctgcatgccgaatacgacgaacgacaggtgagcaccttccacgcg
cagatgcagcaggctgctcgcctcgccagcgagcattccgccgtaggtgaggcacagcgt
cgcaagttccgggtggtcatgctcgacgagtatcaagacacctcgcacgcccagcgggtg
ctgctgcgcagcctgttcgggcagggagtcgacccggaactgaccgtcaacgctgtgggc
gacccgatgcaggccatctactcctggcgcggagccacctcgaataacctcagcgccttc
gtccaggacttttccgtcgacggcgtcgagcccgcgcccaaggcggaactgactaccagc
ttccgcaacccgaaaagcgtactcgcggtggccaacgatgtttcggcggctgtcctgggc
ccggcaggctcggcgaatcgcaccgtggccgcgctcgagccctttggagaaaacgccggc
gaggtggaattctcctggtttgagaccgccgccgaggagcgcgccgcaattgccgatcac
ctcgccgaggcgtatcggaaggataaagaggcaggtgagcgctttaccgccgctgtgctc
gtacgcgcgaacgcggccgccgtgcccatctacgcggagctggccgcacgcggggtgccc
gcggagatcgtctctagctccgggctcatcgatattcccgaggtagcggacctgatcgcc
gtggccacgatgctcgcgcgcccggccgataacgccgcggcgttgcgcgttttgaccagc
cccatggtggggttatccctggcggacgtcaaagcgctcggcgcgcgggcacgcacgctc
gccgagcgggcccaaccgggcgcggccccggcagatgagaacccagcgggctcggcggag
gacgatgcccgcgcccggctgctggctgagatcgcgcaggccaccccggtggatacagac
cagctcaccgggcttgccgacgcggtggccgaccccggcgaaggggaagggctgagcagc
gaggggctcacccgtatccggcgtctcaacgcgacgctgcggcagctgcgcacgtcctcc
ctgcacaaagcactgcccgaactgttcgccgatatcgagctagcaatggggctgcgcacc
gaagtcctcgccgaggcggacccgaacgcggacggcgcgccgggagtcgtgcacctcgat
aagttcttcgatgaggtcgccgcgttcggcgcagtccccggcgccacgctagggcagttc
ctggactttctccaggtcgcccgcgatcgtgagcgcgggctcgccccaggagaggtcacg
gtgcgcgccgatcgcgtgcaaatcctgacggtgcacaaggccaaaggcctggagtggcgg
cacgttgccgttgcccacgtcatggccaggggctgggagggaaaggcggagacgttttta
accaacgtgtttaagctgcccccgggcgttggcggggaccccgatgcggccgaggacttc
acggccggggctgccgaggaccgccgcgagttcgagcagctagccggggagtacaacgag
gccgaaaaggcgcagcagaacgaggaggctgcgcggctgttctacgtcgcggtgacgcgc
gcagaagcgggcctctgggtctccggagccagtttcactgataccgcgcagagccagggc
aagccgtttgagcccttcgcccagctgaagaaccgattccccgacgccgtcggctactgg
ttcgtacccgaggacaaggcagcagacggcgccaccgacatccccgacgccgcggccgga
ggggacgcggaggaaccaaacgacgtgctctttcccgcggtggtcccgcgccccggggcg
cgtgccgcggcgtcggaaattggcagcctcgtcgcggcgggggaactgcccggactcgcc
gacgacgagctatcgtaccagtgggaagccgacgttacggcgctcgtggaggagcagcgc
gcgctcgacgccccagtcgtggaggtggttctgggcgggcgcctgaccgcatccgacctg
gtgaacctgaagcgcgatccgatcgccttcgcgcgctggctgcgccgcccggtgcccttc
aaacccaattcctacgccaagcggggcaccgccttccacgcctggctggaagaccgcttt
gccggggcaagcctgctcgatgaagaccaactgccggggctcggcgaggaagaagtggat
ccggcgcggctgagcgagctcaaggagaagttcctagaaagcgagtgggccgaacgcacc
ccgatgtttgtcgagctgcccttcgaagtgctcatcggcgggcgcgtggtcggcgggcgg
atggacgcggtcttcttcgacgaggcgaacgacgaatggctgatcgtggactggaagacc
ggtgccccgccgaagggcgcggagttgagagccgcagcgatccagcttgcggtgtaccgc
gtcgcattcctggagctgctccgggtgaaaggcaaagaaccgaagccggtacgggcggcc
ttccactacgtcggccacaacttcaccttggagcccaaggacctcgccggctacgcagaa
ttgtccgccatcctcgagttttag
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