Corynebacterium atypicum: CATYP_02885
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Entry
CATYP_02885 CDS
T03227
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cax
Corynebacterium atypicum
Pathway
cax03420
Nucleotide excision repair
cax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CATYP_02885
03430 Mismatch repair
CATYP_02885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cax03400
]
CATYP_02885
Enzymes [BR:
cax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CATYP_02885
DNA repair and recombination proteins [BR:
cax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CATYP_02885
MMR (mismatch excision repair)
Other MMR factors
CATYP_02885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
ADDB_N
AAA_30
Viral_helicase1
DUF6011
AAA_11
HHH
Motif
Other DBs
NCBI-ProteinID:
AIG63804
LinkDB
All DBs
Position
605192..607264
Genome browser
AA seq
690 aa
AA seq
DB search
MIDLSALDDDQRVAATAPRGPVCILAGGGTGKTRTITYRIAHLIDSGFVSPQRVLAVTFT
QRAAGEMRDRLARLGIGGVQARTFHAAARRQLKYFWPQIAGQLPWRLIDNKFPLMGRAAR
AAGVESTTETIRDLLSEIEWAKSCLITPEAYPERIEASDRTPPVAAPKVAEVYKRYEELK
STPEGMLLDFEDLLLHTAGALENSGAIAEEFREQYRSFVVDEYQDVTPLQYRVLKAWLGD
RDDLTVVGDANQTIYSFTGASPEYLLHFSREFPQATVVKLERDYRSTPQVVDLANRVIGA
ARGRVAGTRLELNGMRDNGPEPEFNEYPDEPTEAREVAGKILTLLASGVPASEIAVLYRV
NAQSAAFEQALSDAGVVYQVRGGEGFFHRPEIKQAITQLVRAANSPAAAQLDAVPIGQAV
RHVLAPLGLSATEPQGAQARERWQLLQALAELAEDLQHNDPELGLAGLLVELRRRAESRQ
PPTVEGVTLASLHAAKGLEWDAVFLVGLVEKTLPISHAIAAGEHQVEEERRLFYVGITRA
REHLHLSWARARQEGGRASRNRSRFLDPVVPETGGDEPSTRRGRGSRPRRCRVCGRPLHS
ATERVLNRHEDCPADADQAVFAALRQWRLEKSQQMDVPAYIVFTDATLTAIAEAQPSSPT
ELLGISGVGPVKVEKFGAELLSVLAQFPRR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacctgagcgcgctcgatgacgaccaacgggtggccgccaccgctccccgcgga
ccggtgtgcatcctggccggcggcgggacaggaaagacgcgcacgattacctatcggatc
gcgcacctcatcgactccggcttcgtcagcccgcagcgcgtcctagccgtcacgtttact
cagcgcgcggccggcgagatgcgcgatcgcctcgcccggctggggatcggcggggtgcag
gcgcgcacctttcacgcggctgcgcgacgtcagctgaagtatttctggccgcagatcgcc
ggacagctcccgtggcggctcatcgacaacaagtttccgctgatgggcagggccgcgcgc
gcagctggtgtcgagtccaccacggagacgattcgcgatctgctcagcgagatcgagtgg
gcgaagtcctgcctgatcacccccgaggcctacccggagcgcatcgaggcctcggaccgc
acaccgccggtggctgcgcccaaggtagccgaggtctacaaacgctacgaggagctgaag
tcgaccccagagggaatgctgctggacttcgaggatctcctgttacacaccgcaggtgcg
ctcgaaaactccggggcaatcgcagaggagttccgcgagcagtaccgcagctttgtcgtc
gacgagtaccaggacgtcaccccactgcagtaccgggtgctcaaggcgtggctcggcgac
cgggacgacctcacggtggtgggcgacgccaaccagacgatctactcgtttaccggcgca
agccccgaatacctgctgcacttttcccgggagtttccccaggccacggtagtgaaactg
gagcgcgactaccggtccaccccccaggtcgtagacctagccaaccgcgtgatcggcgca
gcccgcggccgggttgcgggcacgcgtttggagcttaatgggatgcgagataacggcccg
gagcccgagtttaacgagtacccggatgagccgaccgaggcccgcgaggtggccggcaag
atccttactctgttggccagcggcgtgccggcctcagagatcgccgtgctgtaccgcgtc
aacgcgcagtccgcggcgtttgagcaggcgctgagcgacgcgggcgtggtctatcaggtc
cgcggcggggagggcttcttccaccgtccggagatcaaacaggccatcacgcagctggtg
cgggcagcgaactcgcctgccgccgcccagctcgacgcggtcccgatcgggcaggcggtc
cgccacgtgctcgccccgctggggctttcagccaccgagccgcagggggcgcaggcccgt
gagcggtggcagctgctgcaggcgctggcggagctggcagaagatcttcagcacaacgac
ccggagctgggcttggccggcctgctggtcgaactgcgccggcgtgcggaatcccgccag
ccgccgacggtcgagggggtgaccctggccagcctgcacgccgcgaaggggctggaatgg
gacgcggtgttcttggtggggctggtggaaaagaccctgcccatctcgcacgccatcgca
gccggcgagcaccaggtggaggaggaacgtcgcctcttttacgtcggcatcacgcgcgcc
cgggagcacctgcacctgtcctgggcccgagcccggcaggagggcgggcgggcgtcgagg
aaccgcagccgcttccttgaccccgtggttcccgagacgggcggcgatgagccctcgacc
aggcggggccgcggttcccggccgcgccggtgccgcgtgtgcgggcgcccgctgcactcg
gccaccgagcgagtgctgaatcgccatgaagactgccccgctgacgcggaccaggcggtc
tttgcggcactgcggcaatggcgcctagagaagtcccagcagatggatgtgcccgcgtac
atcgtcttcaccgacgccaccttgaccgcgatagctgaggcccagcccagctcgccgacc
gaacttctcggaatctctggggtggggccggttaaggtggagaaatttggcgctgagctg
ctttccgttctggcgcaatttccccgtcgctag
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