Corynebacterium atypicum: CATYP_03225
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Entry
CATYP_03225 CDS
T03227
Name
(GenBank) endonuclease
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
cax
Corynebacterium atypicum
Pathway
cax03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CATYP_03225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cax03400
]
CATYP_03225
Enzymes [BR:
cax01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CATYP_03225
DNA repair and recombination proteins [BR:
cax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CATYP_03225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AIG63847
LinkDB
All DBs
Position
684074..685003
Genome browser
AA seq
309 aa
AA seq
DB search
MPEGDSVFQLARRLQFMTGREVTYCSLRVPRLATVDFTGTVCRRVWPYGKHLFMLFDQDV
LHTHLKMEGTWAIHRAGQRWKKPGFSARVVLRLSCDAGADIEVVGHHLGLVEAFPARQWR
SRMSYLGPDVLGADWADHGRAEARRRLAARPERPVGTAILDQKNLAGVGNEYRAEICFLL
GVHPATPIGAVDLDRLLALAHRLMRANRDSPIRVTTGVRRAGESSYVFGRAGKPCRRCGT
PIASGWLGGAHPAGARRAVPAPRQPGGAANAAGAIAVDARGRPRIPGDPTELERVIWWCP
SCQPLAAGR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaggcgactccgtattccagctggcccggcgcttgcagtttatgacaggccgg
gaggtcacgtactgctcgctgcgcgtgcccagactcgccaccgtggacttcaccggcacg
gtctgtcggcgcgtgtggccatacggcaagcacctattcatgctcttcgaccaggacgtc
ttgcacactcacctgaagatggaaggaacctgggcgatccaccgcgccgggcagcgttgg
aagaagcccggatttagcgcgcgcgtggtgcttcggctttcctgcgacgccggcgcagac
atcgaggtggtcgggcaccacctagggctcgtcgaagccttcccggcccggcagtggcgc
agccggatgagctacctggggcccgacgtactgggcgccgactgggccgaccacggccgc
gcggaggccagaagacggcttgcggcccgtcccgagcgccccgtggggaccgccatccta
gaccagaagaacctcgccggagtgggcaacgagtaccgcgcggagatctgctttctgctg
ggcgttcaccccgccacgcccatcggcgcggtcgaccttgaccgcctcctcgcgctcgcc
caccgcctgatgcgcgcaaaccgcgactcgccgatccgcgtgaccaccggtgtgcgccgg
gccggtgagtccagctacgtcttcgggcgcgcaggcaaaccctgccgccgctgcggaacc
ccgatcgcgtccgggtggctcggcggcgcacacccggctggtgcgcgccgggccgtgccg
gcgccccgccagccgggcggcgcagcgaatgcggcaggtgccatcgcagtcgacgcccga
ggccgcccgcgcatccccggcgatcccacggagctcgaacgagtcatctggtggtgccca
tcctgccagccgctggcggccggcaggtaa
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