Corynebacterium atypicum: CATYP_04200
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Entry
CATYP_04200 CDS
T03227
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cax
Corynebacterium atypicum
Brite
KEGG Orthology (KO) [BR:
cax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cax03016
]
CATYP_04200
Enzymes [BR:
cax01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CATYP_04200
Transfer RNA biogenesis [BR:
cax03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CATYP_04200
Prokaryotic type
CATYP_04200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Bbp16
Motif
Other DBs
NCBI-ProteinID:
AIG63986
LinkDB
All DBs
Position
complement(894563..895438)
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AA seq
291 aa
AA seq
DB search
MTAQDDPLASSGLVVVDKPEGITSHDVVGRLRRIMGTRKVGHAGTLDPMATGVLLAGINR
GTKFLAHLTAATKAYEATIRLGERTSTDDAEGEVIATTAPLSDAELQAGIARLTGDIMQV
PSSVSAIKIDGKRAYARVRAGEEVQLPARPVTVTAFDVLSRSGADVKVSVRCSAGTYIRA
LARDLGGHLTALRRTEAGPFGLDEATPLDELTKSPRLSLSLDEAMARCYPPISVTEPEYH
ALSQGKRLPVDAARAFAGVRAAMGPDGRVVALVEVNGRALKTVFVARPATL
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgactgcacaggatgatccgctggccagctccgggctcgtcgtcgtcgacaagcccgag
gggattacctcgcacgacgtcgtgggccgactccggcgcatcatgggcactcgcaaggtg
ggccacgccggcaccctcgacccgatggccaccggagtattgctcgccggcatcaaccgg
ggcacgaagttcctcgcccacttaaccgcagccaccaaggcctacgaggcgaccatccgg
ctcggggagcgcacctcgaccgacgacgccgaaggcgaggtgatcgccaccaccgccccg
ctttccgacgccgagctccaggcgggcatcgcccggctcaccggcgacattatgcaggta
cccagctccgtttcggcgatcaagatcgacggcaagcgcgcctacgcgcgggtacgcgcg
ggcgaggaagttcagctgcctgcgcgcccggtcacagtgaccgcattcgacgtgctgtcc
cgatccggggcagacgtcaaggtctcggtccggtgttccgcgggcacctacatccgggct
ctcgcccgcgacctaggcggacatctgaccgcgctgcggcgcaccgaggccggccccttc
ggcctcgacgaggcgacaccgctcgacgagctgaccaagtcaccccgcctatcgctctcc
ctggacgaggcgatggcgcgctgctacccgccgatctcagtcaccgagccggagtaccac
gcgctctcgcaaggaaagcgcctccccgtcgacgcagcgagggcgttcgcgggcgttcgg
gcggccatggggcccgacggccgggtcgtcgcgctcgtcgaggtcaacggccgcgcactc
aagacggtgttcgtcgcccgccccgcaaccctctaa
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