Corynebacterium atypicum: CATYP_05865
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Entry
CATYP_05865 CDS
T03227
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cax
Corynebacterium atypicum
Pathway
cax03030
DNA replication
cax03410
Base excision repair
cax03420
Nucleotide excision repair
cax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CATYP_05865
03410 Base excision repair
CATYP_05865
03420 Nucleotide excision repair
CATYP_05865
03440 Homologous recombination
CATYP_05865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cax03032
]
CATYP_05865
03400 DNA repair and recombination proteins [BR:
cax03400
]
CATYP_05865
Enzymes [BR:
cax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CATYP_05865
DNA replication proteins [BR:
cax03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CATYP_05865
DNA repair and recombination proteins [BR:
cax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CATYP_05865
NER (nucleotide excision repair)
GGR (global genome repair) factors
CATYP_05865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
Taq-exonuc
RecR_HhH
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
AIG64221
LinkDB
All DBs
Position
complement(1276369..1278948)
Genome browser
AA seq
859 aa
AA seq
DB search
MLIDGHSMAFRAFYALPVEKFSTSGGQHTNAVYGFLSMLAGIVRDEEPDRMAVAFDVGRH
TFRTDLFPEYKAQREAAPEEFRGQVELIREILGTLGITTLSMENFEADDILATLATQARE
DDGIDQTLIVTGDRDYLQLVDGKTTVLYPTRGVSQLHRFTPQAVEEKYGLSPQQYPDFAA
LRGDPSDNLPKIPGVGEKTAQKWIVKYGDLNNLLDHADEIGGKVGGNLRERLDQVRLNRK
LTQMVTDLQLGVGPADLAMSEAKVAEVAEKFDELEFGTQLRERVLAVIPHDGGEVAGAEE
PQEVAISPDGLGWLEHSADRAGGIALAAVGEETVALLDAARTGVELNLGELSAAEEKIFA
DWLADPGAPKFVHGGKELMHRFAERGLRLAGIAHDTLLAAYLLQPGQRAYDLDVVYQRHL
HRSLADAPIEHAAAIAELAEGLVAELESINGYELYLDLELPLIEILARMESVGIAVDAGV
LDEQLAGFEDAVRREESAAREIAGDPKLNLSSPKQLQVVLFDTLNMPKTKKTKTGYSTAA
KEIEALAVKNPHPFLDHLLAHREYQKMKSTLEGLIKSVGQDGRIHTTFHQTVTSTGRLSS
SDPNLQNIPVRTAAGRKIRSAFRPGAGYECLITADYSQIEMRVMAHVSGDAGLIQAYQEG
EDLHNFVGSRVFDVPVDEVTPELRRRVKAMSYGLAYGLSAYGLSQQLGIAPGEAKQIMSS
YFERFGGVKDYLDGVVEKARADGYTETVFGRRRYLPELASTNRIARENAERAALNAPIQG
TAADIIKVAMIRVDREFRTRELKSRVLLQVHDELVVEVAPGEQDVVRELLAREMDGAISL
RVPLEVSVGQGENWDAAAH
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
ctgcttatcgatggccactcgatggcgtttcgcgccttctacgctttgcccgttgagaaa
ttctccacctcgggcgggcagcacactaacgcggtttacggattcctctcgatgctcgcc
ggcatcgtccgtgacgaggagcccgaccgcatggctgtcgctttcgacgtcggccggcac
acgtttcgcacggatctctttccggagtataaggcgcagcgcgaggcggcacccgaagag
tttcgcggccaagtcgagctcatccgcgagatcctgggcaccctggggatcacgaccttg
agcatggagaacttcgaggctgatgacatcctggccacgttggcgactcaagcccgcgag
gacgacgggatcgaccaaaccttgatcgtcaccggcgaccgcgactatctccagctggtc
gatggcaagacgacggtgctttatcccacccgcggcgtctcccagttgcaccgctttacc
ccccaggccgtggaagaaaaatatgggctgtcacctcagcagtacccggacttcgccgcg
ctgcgcggggacccttcagataacctgcccaagatcccgggcgtgggggagaagacggcg
cagaagtggatagtcaagtacggggacttgaataatcttctggatcatgctgacgagatc
ggcgggaaggtgggcggcaaccttcgcgaacgcctggaccaggtgcggctgaaccgcaag
ctgacccagatggtcacggacttgcagttgggcgtgggccccgccgatttggccatgtcc
gaggcaaaggtggcggaggtagccgagaagttcgacgagctggagtttggcactcagctc
cgcgagcgcgtgctggcggtgattcctcacgacggcggcgaggttgctggcgccgaggag
ccccaggaagtggcgatctcgcctgatggactggggtggttggagcattccgcagaccgc
gcgggtgggatcgctttggcggcggtgggcgaggagaccgtcgcgcttctcgacgccgcg
cgcacgggagtcgagctcaacttaggcgagctgagcgcggccgaggagaagattttcgcc
gattggttggccgatcccggcgccccgaagtttgtgcacggcggcaaagaacttatgcac
aggtttgctgagcggggactgcgcctggccggaattgcgcatgacacgctgctggcggcg
taccttttgcagcctggccagcgtgcctacgatctcgacgtggtctaccaacgccacctg
caccgcagcttggcggatgctccgatcgagcatgccgccgccatcgccgagcttgccgaa
gggttggtagcagaactcgagtcgatcaacggctacgagctgtacctggatctggagctg
ccgctcatcgagatcctggcgcgcatggaatctgttggcattgccgtcgacgcgggggtg
ctcgacgagcagcttgccggttttgaggacgcagtgcggcgcgaggagtcggccgcccgc
gagatcgccggtgaccccaaactcaacctgtcgagtcccaagcagctgcaggtagtgctt
tttgacacgctcaacatgccgaagacgaagaagaccaagacgggttactccaccgcggcc
aaagagatcgaagcgctggcggtgaagaacccgcaccccttcctggaccacctgttggcg
caccgcgagtaccagaagatgaagtcgacgctggagggcctgatcaagtcggtgggccag
gacgggcgcatccacaccacgttccaccagactgtgacctccacgggccggctctccagt
tcagatccgaatttacagaacatccccgtgcgcacggccgccgggcgcaagatccggtcg
gccttccggcctggcgcgggctacgaatgcctgattaccgccgactactcgcagattgag
atgcgggtgatggcccacgtctcgggcgatgcgggccttatccaggcttaccaagagggc
gaggacctgcataacttcgtcggttcgcgggtcttcgacgtgcccgtcgatgaggtgacc
ccagagctgcgccggagggtgaaggcgatgagctatgggttggcctatgggttgtccgcc
tacggtctctcgcagcagctgggcatcgcgcccggggaggccaagcagatcatgtccagc
tacttcgagcgcttcggcggtgtgaaggattatctcgacggcgtggtggaaaaggcgcgg
gcggacggctacaccgaaaccgtcttcgggcggcggcgatacttgccggagctggcgagc
actaatcgcatcgcgagggaaaacgccgagcgcgccgcgctcaacgcgccgattcagggc
accgccgcggacatcatcaaagtggccatgatccgcgtcgaccgcgagtttcgcacccgc
gagttgaagtcgcgggtgctcttgcaagtccacgacgagctcgtggtcgaggtcgcccca
ggcgagcaggatgtggtccgcgagcttctcgcgcgcgagatggacggtgcgattagcctg
cgcgtgccgctcgaggtctcggtcggccagggagagaattgggacgccgcggcgcactag
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