Corynebacterium atypicum: CATYP_05925
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Entry
CATYP_05925 CDS
T03227
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cax
Corynebacterium atypicum
Pathway
cax03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CATYP_05925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cax03400
]
CATYP_05925
Enzymes [BR:
cax01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CATYP_05925
DNA repair and recombination proteins [BR:
cax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CATYP_05925
Prokaryotic type
CATYP_05925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
AIG64231
LinkDB
All DBs
Position
complement(1288602..1289261)
Genome browser
AA seq
219 aa
AA seq
DB search
MNLPVHPSWQPVLAPVEERVHQLGEFLRAENAAGRGYLPAGSDVLRAFQYPFDEVKVLIV
GQDPYPTPGHAMGLSFATQPGVRPLPKSLNNIFTELADDLGIEKPTDGDLTPWCEQGVAL
FNRVLTVQPRKAASHRGRGWEEVTEAAIRALAQRDKPLVAILWGRDAQSCARFLGSTPRI
ESPHPSPLSAHRGFFGSRPFSRANAELARQHATAVDWRL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttcccgtccatccttcctggcagcctgtgctggcgccggtagaagagcgcgtg
catcagctcggcgagtttttgcgcgcggaaaacgccgctgggcgcggctatctgcccgcg
ggctcggatgtgttgcgcgcctttcaatatccgttcgatgaggtcaaggtcttgatcgtg
gggcaagacccgtatcccaccccggggcacgccatggggctttcttttgccacccagccg
ggggtgcgcccactgcccaagtcgctcaacaacatcttcaccgagttggctgacgacctc
gggatagaaaaacccactgacggggacttgaccccttggtgcgagcagggcgtggccctg
tttaaccgggtgctcaccgtgcagccgcgtaaggccgcctcgcatcgtggccgtggctgg
gaggaagtcaccgaggccgcgatccgggcactggcgcagcgcgacaagcccctcgtggct
atcttgtggggccgtgacgcccagagctgcgcgcgttttctgggctccaccccgcgcatc
gagtccccgcacccgtcgcctctttctgctcatcgcggtttctttggatcccgtcccttc
agccgcgcaaacgccgaactcgcccgccagcacgctactgccgtggactggcggttgtaa
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