Corynebacterium atypicum: CATYP_10265
Help
Entry
CATYP_10265 CDS
T03227
Name
(GenBank) DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cax
Corynebacterium atypicum
Pathway
cax03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CATYP_10265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cax03400
]
CATYP_10265
Enzymes [BR:
cax01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CATYP_10265
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CATYP_10265
DNA repair and recombination proteins [BR:
cax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CATYP_10265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-ProteinID:
AIG64865
LinkDB
All DBs
Position
2265009..2265824
Genome browser
AA seq
271 aa
AA seq
DB search
MPEGHVIHRLAEKLDARFGGTPVEVSSPQGRFSREAAELSGSTFDGAEAWGKHLFLRFAE
ERIVHIHLGLIGTFRIQPFAEPKGQVRLRIADTGHQLAADLHGPQWCRLITPPEMEGVIA
KQGADPLRGDANPAGTFAAVQRSRRGVGSLLMDQKLFAGVGNIYRAETLFRLGISPALPG
NQLTDEQLHAIWADLVELMAAGKAAGRIDTVRPEHTPEAMHRPPRKDDHGGEVYVYRRTG
LPCLVCGTPIAQRILDGRNLFWCPGCQGGIA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaggccacgtcatccatcgcctcgccgaaaagctggacgcacgcttcggcggc
acgcccgtggaggtcagctcgccccagggacggtttagccgcgaggcagccgagctcagc
ggctccaccttcgacggcgcggaagcctggggcaagcacctctttctccgcttcgccgaa
gagcgcatcgtacacatccacttaggcctcatcggcaccttccgcatccagcccttcgcc
gagcccaagggccaggtccgcctgcgcatagcggacaccggccaccagctcgccgctgac
ctccacggcccccagtggtgccggctgatcacgcccccggagatggagggggtcatcgcc
aagcaaggcgccgatcccctgcgcggcgacgccaacccggccggcaccttcgcagcggtg
cagcgcagccggcgcggggtcggctcactgctgatggaccagaagctcttcgccggagtg
ggcaacatctaccgcgccgagacactgttccggctcggcatctcaccggcgctgcccgga
aaccagctcaccgatgagcagctgcacgcaatctgggccgacctggtggagctaatggcg
gcgggcaaagccgcgggaaggatcgataccgtacgccccgaacacacgcccgaggccatg
catcgcccaccgcgcaaagacgaccacggcggggaggtctacgtttaccggcggaccgga
ttaccctgcctggtctgcggcacccccatcgcgcaacgcattctcgacggccgcaacctc
ttctggtgtccgggctgtcagggcgggatcgcctag
DBGET
integrated database retrieval system
