Corynebacterium axilliensis: ACKFR8_10815
Help
Entry
ACKFR8_10815 CDS
T11578
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
caxi Corynebacterium axilliensis
Pathway
caxi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
caxi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACKFR8_10815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caxi03021
]
ACKFR8_10815
03400 DNA repair and recombination proteins [BR:
caxi03400
]
ACKFR8_10815
Enzymes [BR:
caxi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACKFR8_10815
Transcription machinery [BR:
caxi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACKFR8_10815
DNA repair and recombination proteins [BR:
caxi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACKFR8_10815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
XLO16408
LinkDB
All DBs
Position
2248627..2252106
Genome browser
AA seq
1159 aa
AA seq
DB search
MAVSRQTKSVANIPGAPKRYSFAKISEPIAVPGLLDLQLDSYAWLIGTPEWREREQAERG
DDARVTSGLEDILEELSPIQDYSGNMSLSLSEPRFEPVKNTVDECKEKDINYSAPLYVTA
EFINNDTQEIKSQTVFIGDFPMMTDKGTFIVNGTERVIVSQLVRSPGVYFDQTIDKSTER
PLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWSEEQIKERFGFSEL
MMSTLESDGVSNTDEALLEIYRKQRPGEQPTRDLAQALLDNSFFRAKRYDLAKVGRYKVN
RKLGLGGDHDGLMTLTEEDIAVTLEYLVRLHAGEREMKAPNGETIAIHTDDIDHFGNRRL
RTVGELIQNQVRVGLSRMERVVRERMTTQDAESITPTSLINVRPVSAAIREFFGTSQLSQ
FMDQNNSLSGLTHKRRLSALGPGGLSRERAGIEVRDVHASHYGRMCPIETPEGPNIGLIG
SLASYARVNAFGFIETPYRKVVDGKVTDQVEYLTADEEDRFAIAQAEVEKDADGTLTGDR
IEVRLKDGDIGVTDASGVDYVDVSPRQMVSVATAMIPFLEHDDANRALMGANMQRQAVPL
VRSEAPYVGTGMEQRAAYDAGDLIITPKAGVVENVTADLITIMDDEGQRDTYMLRKFERT
NQNTNYNQTPLVSLGERVEAGQVLADGPGTHNGEMSLGRNLLVAFMPWEGHNYEDAIILN
QRIVEEDILTSIHIEEHEIDARDTKLGPEEITREIPNVSDDVLRDLDERGIVRIGADVRA
GDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGETGKVIGVSRFSREDD
DDLAPGVNEMIRVYVAQKRKIQDGDKLAGRHGNKGVVGKILPPEDMPFMEDGTPVDIILN
THGVPRRMNIGQVLEVHLGWLAHAGWKIDTEDPANADLLKKLPEELYDVPPESLTATPVF
DGATNEEISRLLASSKPNRDGDVMVDEHGKARLFDGRSGEPYMYPVSVGYMYMLKLHHLV
DEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELLTIKSDDVV
GRVKVYEAIVKGDNIPDPGIPESFKVLLKELQSLCLNVEVLSTDGTPMELSGSDDDDMDG
APSLGINLSRDERSDADIA
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
ttggcagtctcccgccagaccaagtcagtggccaacatccctggagccccgaagcgatac
tccttcgctaagatcagcgagcccatcgctgtcccgggcctccttgatctacaactcgac
tcctacgcgtggctcatcggcacccccgagtggcgcgaacgcgagcaggcagagcgcggc
gatgacgcacgcgtgacgagcggccttgaggatatcctcgaggagctttctccgatccag
gactactcgggcaacatgtccctgtccctgtcggagcctcgcttcgagccggtgaagaac
accgtggacgagtgcaaagagaaggacatcaactactcggcgccactgtacgtcaccgca
gaattcattaacaacgacacccaggagattaagtcccagaccgtcttcatcggcgatttc
ccgatgatgaccgataagggcaccttcatcgtcaacggcactgagcgcgttatcgtctcg
cagctcgtgcgttccccgggtgtgtacttcgatcagaccatcgataagtccaccgagcgc
ccgctgcactccgtgaaggtcattccttcccgcggtgcgtggctcgagtttgacgtcgac
aagcgcgacaccgtcggcgtccgtatcgaccgtaagcgtcgccagccggtgacggtgctg
ctcaaggctctgggctggagcgaggagcagattaaggagcgcttcggcttctccgagctc
atgatgtccaccctggagtccgacggcgtgtccaacaccgacgaggctctgctggagatt
taccgtaagcagcgcccgggcgagcagcccacgcgtgaccttgcgcaggctctgctggat
aactccttcttccgcgccaagcgctacgacctggccaaggtgggccgctacaaggtcaac
cgcaagctgggactgggcggcgaccacgacggtctcatgaccctgaccgaggaagacatt
gctgtcaccctcgaatacctggtgcgcctgcatgccggcgagcgtgagatgaaggctccg
aacggcgagaccatcgccatccacaccgacgacattgaccactttggtaaccgtcgtctg
cgtaccgtgggcgagctaatccagaaccaggtccgcgtcggcctgtcccgcatggagcgc
gtcgtccgcgagcgcatgaccacccaggacgcggagtcgatcaccccgacctccctgatt
aacgtccgcccggtttccgctgccatccgcgagttcttcggtacctcccagctctcgcag
ttcatggaccagaacaactccctgtccggcctgacccacaagcgccgcctgtccgcgctg
ggcccgggcggtctgtcccgtgagcgcgccggcattgaggtgcgagacgtgcacgcttcg
cactacggccgcatgtgcccgattgagacccccgagggtccgaacattggtctgatcggc
tcgctggcgtcctacgcccgcgtcaacgccttcggcttcatcgagaccccgtaccgcaag
gtcgtggacggcaaggtcaccgaccaggtggagtacctgaccgccgatgaagaggatcgc
ttcgccattgcccaggcggaggttgagaaggatgccgatggcaccctgaccggcgaccgt
attgaggtccgcctcaaggacggcgacatcggcgtgaccgacgcttccggcgtggactac
gtcgacgtgtccccgcgccagatggtgtctgtggcaaccgccatgattccgttcctcgag
cacgacgatgctaaccgtgccctcatgggcgcgaacatgcagcgtcaggccgtgccgctg
gtgcgttccgaggccccgtacgtgggcaccggcatggagcagcgcgctgcgtacgacgcc
ggcgacctcatcatcaccccgaaggcgggtgtggtggagaacgtcaccgcagacctcatc
accattatggatgacgagggtcagcgcgatacctacatgctgcgcaagttcgagcgcacc
aaccagaacaccaactacaaccagaccccgctggtgtccctgggtgagcgtgtggaggca
ggccaggtgcttgccgacggccccggtacccacaacggtgaaatgtccctcggccgcaac
ctgctggttgcctttatgccgtgggaaggccacaactacgaggacgccatcatcctcaac
cagcgcatcgtggaggaggacatcctcacctcgatccacatcgaggagcacgagatcgat
gcgcgcgataccaagctgggcccggaggagatcacccgcgagatcccgaacgtctccgac
gacgtcctgcgtgacctcgacgagcgcggcatcgtccgcatcggtgctgacgttcgcgcc
ggcgacattctggtgggtaaggtcaccccgaagggtgagaccgagctgaccccggaggag
cgcctgctgcgcgccatcttcggcgagaaggcccgcgaggtgcgcgatacctccatgaag
gtcccgcacggtgagaccggtaaggtcatcggcgtctcccgcttctcccgcgaggacgac
gacgacctggccccgggcgtcaacgagatgatccgcgtctacgtggctcagaagcgcaag
atccaggacggcgataagctggccggccgccacggtaacaagggtgttgtgggcaagatc
ctgccgccggaggacatgccgttcatggaggatggcaccccggtggacatcatcctcaac
acccacggtgtgccgcgtcgtatgaacatcggtcaggtcctcgaggtccacctgggctgg
ctcgcacacgccggctggaagatcgacaccgaggatccggccaacgccgacctgctgaag
aagctgccggaagagctgtacgacgtcccgccggagtccctcaccgcgaccccggtcttc
gacggtgccaccaacgaggaaatctcccgcctgctggcctcctccaagccgaaccgcgac
ggtgacgtcatggtggatgagcacggtaaggcccgcctcttcgatggccgctccggcgag
ccgtacatgtacccggtctccgtgggctacatgtacatgctcaagctgcaccacctggtg
gacgagaagattcacgcccgctccactggtccgtactccatgattacccagcagccgctg
ggtggtaaggcacagttcggtggccagcgcttcggcgagatggaggtgtgggcaatgcag
gcatacggcgctgcctacaccctgcaggagcttctgaccatcaagtccgatgacgtcgtc
ggccgtgtcaaggtctacgaggcaatcgtcaagggcgataacatcccggatccgggcatc
ccggagtccttcaaggtcctcctcaaggagctgcagtccctgtgcctcaacgtggaggtt
ctctccaccgacggcacgccgatggaactgtccggctccgacgatgacgacatggatgga
gcaccgtccctgggcattaacctgtcccgcgacgagcgctccgacgctgacatcgcctaa
DBGET
integrated database retrieval system
