Clostridium acetobutylicum EA 2018: CEA_G1014
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Entry
CEA_G1014 CDS
T01864
Name
(GenBank) Superfamily I DNA helicase (rep-like helicase)
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cay
Clostridium acetobutylicum EA 2018
Pathway
cay03420
Nucleotide excision repair
cay03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CEA_G1014
03430 Mismatch repair
CEA_G1014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cay03400
]
CEA_G1014
Enzymes [BR:
cay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CEA_G1014
DNA repair and recombination proteins [BR:
cay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CEA_G1014
MMR (mismatch excision repair)
Other MMR factors
CEA_G1014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
PcrA_UvrD_tudor
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
ADZ20053
LinkDB
All DBs
Position
1147897..1150095
Genome browser
AA seq
732 aa
AA seq
DB search
MISEAVKREFCLLRDKIIEQSYKHLDNMQRNAVFNGGSNCIVVACPGAGKTQVILNRVDY
LCKFGPVYNTEYVPDSLKQEDLEYMRDYLNNFSIKKTSIITNRIRHLMSLKKVSTDNIIV
ITFTKAAAVNMKRRYINYFNSRKTPFFGTFHSLFYKILSRHKGNIKIIEEIQKYNIVKSV
LMKYMDEVNDDKLREVINDISSLKCSECSMEDFKSQVDKKIFEECYERYESYKKDNSLMD
FDDLQIECMKMFEERPELLRGYSNLFMYVLVDEFQDSDSLQIKLLKMLSEKSSIYAVGDE
DQCIYSFRGSRPDCMVDFDKIFKDGRKLFLSTNYRSVRNIVDISKNLIANNEKRNLKDID
ANKSDSGKITIINSKNENIEADKITIEIEKLKNISDYNYSDIAILYRTNVESRSLIDSFI
RRNIPFKFLDREYNFFEHFICKDIAAYLRLSIDEFNRESFLRIINRPFRYISKVNLQKVK
SYGNMESVFDILKNIEDLPIFQIKDIEKLQTKIRNLNKMSLLSAVQFIISDLGYSDYIQD
YCKKRGFDVEEMMDIIEEFKSACDGYNNIIKFLSHIEEVREKIKENKVDTSKDTVLLSTI
HGVKGMEFKNVFIINCDEENIPHKNSIDENIEEERRLFYVGITRAIENLWISITSELKGC
VRKPSRFIKECKLNLNDFEGKYKKGDKVEHVSFGLGEIISIEDEVTEIRFKNDTRRFDTS
VLLNAKLMRRCQ
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagaagctgtaaaaagagaattttgtttattgagagataaaataatagaacaa
agctataaacatcttgataacatgcagagaaatgcagtttttaatggtggaagtaactgc
attgtcgtagcatgtccaggagcaggaaaaactcaagttattcttaatagagtagattat
ctatgtaaatttggaccagtatataatactgagtatgttcctgattctctaaaacaagag
gatttagaatatatgagggattacttaaataatttttcaattaagaagacaagcataata
accaatagaattaggcatcttatgagcttgaaaaaagtctccactgacaatatcatagta
ataacttttacaaaggctgcagcggtaaatatgaagcgaagatatataaactattttaat
agtagaaaaacgcctttttttggaacctttcatagtttgttctataagatactatcaagg
cataaaggaaatataaaaatcatagaggaaattcaaaaatacaatatagttaaatcagtt
cttatgaagtacatggatgaagtaaatgatgataagctaagagaggtaataaacgatata
tcaagtcttaagtgcagcgagtgcagcatggaagactttaagtctcaagtagataagaaa
atttttgaggaatgctatgaaagatacgaaagctataagaaggataattcacttatggat
tttgatgatcttcaaatagagtgtatgaaaatgtttgaggaaagacctgaactccttcgc
ggctacagtaatctatttatgtatgttttagttgatgaatttcaagattccgattctctt
caaataaagcttttaaagatgctaagtgaaaaaagcagtatatatgcagtaggagatgaa
gatcaatgtatatattcttttagaggttcaaggccagattgcatggtggattttgataag
atatttaaggatggaagaaagctatttctaagtacaaactatagaagtgttaggaatata
gttgacatttccaagaatttaatagcaaataatgagaagagaaatttaaaggacatagat
gcaaataaatcagacagtggaaagataactataattaacagcaaaaatgagaatatagaa
gcagataaaataacaatagaaattgaaaaattaaaaaacatatcagactataattattct
gatattgcgatactgtatagaactaatgttgaaagtaggagtctaattgacagtttcata
agaagaaatattccttttaagtttttggatagggagtataatttttttgaacattttata
tgtaaagatatagctgcgtatttaaggcttagtattgatgaatttaatcgcgaaagtttt
ttgcggataataaatagaccatttaggtatataagtaaggttaatcttcaaaaagtaaaa
agttatggcaatatggaaagtgtctttgatatattaaaaaatatagaggatcttcctata
ttccaaattaaagacattgaaaaacttcaaactaagataagaaatttaaataaaatgtcc
cttttaagtgctgtgcagtttataatttcagatttaggctatagtgattatattcaagat
tactgtaaaaaaagaggctttgatgtggaagaaatgatggatataattgaagaatttaaa
agtgcttgtgatggatataataatataattaaatttctttcacatatagaagaggttagg
gagaaaataaaagaaaataaagtagatacaagtaaggacacggttcttttaagtacaatt
cacggagtaaaaggcatggaatttaaaaatgtatttataataaactgtgatgaggaaaat
ataccacataagaacagtattgatgagaatatagaagaggaaagaagacttttttatgtt
ggaataacgcgtgcaatagaaaatttgtggatttctataacgagtgagcttaaaggctgc
gttagaaagccttcaagatttataaaggaatgtaaacttaatttgaatgattttgaagga
aaatataaaaaaggtgataaggtagagcacgtttcttttggcttaggtgaaattataagt
attgaagatgaggttacggaaataaggtttaagaatgacactagaagatttgataccagt
gtacttttgaatgcaaaattaatgcgaagatgccagtga
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