Clostridium acetobutylicum EA 2018: CEA_G1235
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Entry
CEA_G1235 CDS
T01864
Symbol
dnaE
Name
(GenBank) DNA Polymerase III Alpha chain (dnaE)
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cay
Clostridium acetobutylicum EA 2018
Pathway
cay03030
DNA replication
cay03430
Mismatch repair
cay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CEA_G1235 (dnaE)
03430 Mismatch repair
CEA_G1235 (dnaE)
03440 Homologous recombination
CEA_G1235 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cay03032
]
CEA_G1235 (dnaE)
03400 DNA repair and recombination proteins [BR:
cay03400
]
CEA_G1235 (dnaE)
Enzymes [BR:
cay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CEA_G1235 (dnaE)
DNA replication proteins [BR:
cay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CEA_G1235 (dnaE)
DNA repair and recombination proteins [BR:
cay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CEA_G1235 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DASH_Ask1
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ADZ20273
LinkDB
All DBs
Position
1364350..1367688
Genome browser
AA seq
1112 aa
AA seq
DB search
MSYAELHCHDCYSLLDAISKPEEIISKAKEYGYSAIAITNHGNMFSMVNFQKEGEKQGVK
TILGIEAYEADNLRIKDDTRYHLILLAKNNEGLKALYELSSISYLEGFYKKPRLDIKEIE
PYAKDLIISSACMAGRIDRLLLADKYNEAKEWIYKYKKVFPNFYLEMQHHDVIEQANLNK
LIVRLGKETGTPYIMTSDSHYINKEDQKAHSIFIQTNEKREVGEIYDGCYLKSEKEIKEI
MMKQIDKDDIELAISNTEKIAKECNVKIDLSLPNQMPEIPIPKEFKNINQYYMYLINKGF
KEKKLNKLPKNELKKHIERIKSEYEVLDYVHYIDYFVMLYMLTKAAKKRNIPLGFSRGSG
GNCLTLFDMGVTGINSLRYNLDFSRFASKGRTSLADYDMDMSKRRRKEIIDISKELFNKY
EDILHTQVAPICTFNSFSTKVACRDIGKALQVNNTYPDLTYQVRDIVAKMIPKVTRYDEE
TGEAIEEDQQLKSIIDSNEKLQTYAKKYPLWFKYIIKLEGLPKSLGCHASGVVISPKPII
DYAPLCLNKDKQPMIQLEMHNVLDDLHLVKMDFLGLKTLDVIDDALKLAKLTYDDIDINK
INLNDPKVYKNIYKKGNTIGVFQMESAEARQMNIDAQTDNIEDVIALNALNRPACKAMFP
DFVENKQHPENMKLIHEDLRSILQSTYGVLLYQEQSLSIFRLANFPDSEVDLARRAIGKK
DMEIMKSLEEKLRDKVVKDEDGHILWHYGLKQRGWADKQIEDIWKLLLKQATYSFNKGHS
TAYGLLSYITAWLKTYYPTEFMTALLNSEIGDYEKIAKYIIECKKMNVKVIEPDINKSID
FFSISKSSILFGINMIKNVGDSVIPDIINNRPYQSFNDFITRCNIGKRATIALIKSGAFN
EFNKDKSTLLYEYCKSAYTPTVYKPVKNLKTKKQMFELGLVEDEITWKDKDLCLARLNAY
NKNKYIKKEKERYEKCYKEFEEKYMQGSIEDWQFETLSMYLTVDPFKELRKILKPFDDMG
EGIGLIAGTIFAIENKVDKKNNKYAFVSLINQESKIIEAVTWSSIYSRYQEFIKSGTKIM
CLGKKKDTLFSIDEIKLLDEWKKELKGSVYNN
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacgcagagttgcattgccatgactgctatagtttattagatgctatatctaaa
ccagaagagattataagcaaggcaaaagaatatggatattcagctattgctataactaat
catggcaatatgttctcaatggttaattttcaaaaagaaggagagaaacagggagtaaaa
actattttaggaatagaagcttatgaagcagacaatttaaggataaaagacgatacaaga
taccatttaattcttctagcaaaaaataacgaagggttgaaagcactttatgaactatcc
tccatttcttatttagaaggcttttataaaaaacctaggttagatataaaagaaattgag
ccttatgcaaaagacctaattatatctagtgcttgcatggctggaagaatagataggcta
ttattagcagataaatataatgaagctaaagaatggatttataaatataaaaaagtattt
cccaacttctatttagaaatgcagcatcatgatgtaatagaacaagccaatctgaacaaa
ttaattgtaagattaggaaaagaaacaggtacaccatatataatgactagcgattctcat
tatattaataaagaagatcaaaaagcccattctatatttattcaaacaaatgaaaaaaga
gaggttggagaaatatatgatggttgttatttgaaatcagaaaaagaaataaaagaaata
atgatgaaacaaatagacaaagatgatatagaacttgctataagtaatactgaaaaaata
gcaaaagaatgtaatgtaaaaatagatttatcacttcctaatcaaatgccagaaataccc
ataccaaaagaatttaaaaatattaatcaatattatatgtatttaattaataaaggattt
aaggaaaaaaaattaaataaacttcctaagaatgaattgaaaaaacatattgaaagaatt
aaatcagaatatgaagttttagattatgttcattatatagattattttgtaatgttatat
atgctaaccaaggcagcaaaaaaaagaaatatacctcttggatttagtcgtggttcagga
ggaaattgtttgacattgtttgacatgggggttacaggaataaatagcttaagatataac
ttagatttttcaagatttgcaagtaaaggtagaacttcattagcagattatgatatggat
atgtcaaaacgtagaaggaaagaaattatagacatttcaaaagaattatttaataaatat
gaagatattcttcatacacaagtagctccgatatgtacattcaattcattttcaacgaaa
gttgcctgtagagatataggaaaagctcttcaggtaaataatacttatcctgatttaaca
tatcaagttagggacattgttgcaaaaatgattccaaaagttacaagatatgatgaagaa
acaggagaagctatagaagaagaccagcaattaaaaagtataatagattctaatgaaaaa
ttacaaacttatgctaaaaaatatccattatggtttaaatacattataaagttagaaggg
ttaccaaaatctttaggatgtcatgcatcaggagttgtcatatcccctaaaccaattata
gattatgctccattgtgcttaaacaaagataaacagccaatgattcaactagaaatgcat
aatgttttagacgatttacatttagtaaaaatggactttttaggtttaaaaactcttgat
gttatagatgatgctttgaaattagcaaaattaacttatgatgatatagatataaataaa
ataaatttaaatgatccaaaagtttataaaaatatctataagaagggcaacacaataggc
gttttccaaatggaaagtgcagaagctcgtcaaatgaatattgatgctcagacagataat
atagaagatgtaattgcacttaatgctcttaatagacctgcatgtaaagctatgtttcct
gattttgtagaaaacaaacaacatccagaaaatatgaaattaattcatgaagatttaaga
tctatattgcaaagcacatatggagtattgttatatcaggagcaatctttatctatattc
cgattagcgaattttcctgattcagaggtggatttagcacgtagagccattgggaaaaaa
gatatggaaatcatgaaatcgcttgaagaaaaattgagagataaagtagtaaaagatgaa
gatggtcatattctatggcattatggactgaagcaaagaggatgggcagataaacaaata
gaagacatatggaaacttttattgaaacaagctacttattcattcaacaaaggacactct
actgcttatggattactttcttatattacagcatggttaaagacttattatcctactgaa
tttatgacagcgctattgaattcagaaataggtgattatgaaaaaattgcgaagtatata
attgaatgcaagaaaatgaatgtaaaagttatagaaccagatataaataaatctatagat
tttttctcaataagtaaaagttctatattattcggaataaatatgattaaaaatgttgga
gattctgttattccagatattataaataacagaccataccagtcatttaatgacttcata
acacgctgcaatataggtaaacgagctactatagcattaataaaatcaggagcttttaat
gagtttaataaagataaaagcactcttttatacgaatattgtaaatcagcatatacacca
acagtatataaacctgtaaaaaaccttaaaacaaaaaaacaaatgtttgagttaggttta
gttgaagatgaaattacttggaaagataaagatttatgccttgctaggttaaatgcatac
aacaagaacaagtatattaaaaaagaaaaagaaagatatgagaaatgttataaagaattt
gaagaaaaatatatgcaaggtagtatagaagattggcaatttgaaactttgtctatgtat
ttaacagttgatccatttaaagaacttaggaagatactaaaaccatttgatgatatggga
gaaggtattggtttaatagctggaactatttttgcaatagaaaataaagtagataaaaaa
aataataaatatgcttttgtatcacttataaatcaagaaagtaagattatagaagctgta
acatggagtagtatttattctcgttatcaggaatttataaaatcaggaacaaaaattatg
tgtttaggaaagaaaaaagacacgctgtttagtatagatgaaataaagttactagatgaa
tggaaaaaagaactaaaaggaagtgtgtacaataattag
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