Clostridium acetobutylicum EA 2018: CEA_G2745
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Entry
CEA_G2745 CDS
T01864
Symbol
sbcC
Name
(GenBank) ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cay
Clostridium acetobutylicum EA 2018
Brite
KEGG Orthology (KO) [BR:
cay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cay03400
]
CEA_G2745 (sbcC)
DNA repair and recombination proteins [BR:
cay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CEA_G2745 (sbcC)
Archaeal homologous recombinant proteins
CEA_G2745 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
ABC_tran
Pox_A_type_inc
AAA_16
DUF6120
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADZ21782
LinkDB
All DBs
Position
complement(2860643..2864134)
Genome browser
AA seq
1163 aa
AA seq
DB search
MKPIRVRIKGLNSFENEQEINFEKLTKRGLFGIFGPTGSGKTTILDSITLSLYGEVARKS
SNFMNTNCNSLNVSFEFQISGKEIKRYLVEREFRRDNKTGSVRSKSAKIVDITGDEVEVL
EEGAKSVNEKCQEIIGLSLDDFTRTVVLPQGKFSEFLKLEGKERRNMLERLFNLQEYGDE
LSFKLARKIRKEREKENVLVGELKGYENINEDVLKERRELLKENNDFFNEASKEYLKAEE
EYNEGKEVWGLQIEIEEKNRVRKDLMEKKDEIDLKEKRARLGESSSKVKPYIDNYENTLK
QIDILKEQILSRENTMKAISLEKEDMEKKLSIAKDNKEKALPKFMIKHHIILDAIKEKDL
LDNIKLEKKRLQGKIEKLSLEASNKEELIKQNIKDIDSLTLKIQNLESKIDNLKVPEEYK
NKINEGIFLLRNYDEKLKHKNKLGLDCDKFQVDFEKAKSKKEMLFNKLEEERSKLDTYTK
KLQDLNKDFPKDDVLLTFQEKLNDSRQKWAKYSEYNESLKASLRVVENSEQVLRTKKEEM
TKLEDKISKVNIKIESLETENMAHVLREKLKSGEACPVCGSVHHIKEGFKEVDLKALETL
KSELEGFEKKRKFENEEIVMCEASIKVEEKNIKKLNESINNLGEEFKEVSLESMEKKFNY
LKEKVNKFNLEKIQLDDNIKDLSERSNKIEVEYQKEKTVEKQCEKRIVDLKSELEEAIKE
FNEVAYTIENLKAELKIQDFKFEMKEILEKERVRVEAEGEIKDLRNLLNIRHTEKEQLMD
KCSRLKEELSKNKAELKEKDKIINEKIELIKNKVGVLDNLYELKEKIEGTIKKIEEQYNL
CDKKMNEIEDKYRKCSDEIIKYHSNLSSLKDRKVNDIDKLNKILMEEKFENIEKAKENYL
NDKEINLLKSDVEKYKNELSKVNGAVEVLSKKLKNRKLTEEKWIEIQNNRVEKASKAKAL
QERSIKLEEEVKNIEIKLKELGKLLKTKQELEHKLSLLDDLEKLFKGKKFVEFVALNQLK
YISIEASKRLKEITGGNYGLEVDDNGKFIIRDYKNGGAKRDASTLSGGETFVTSLALALS
LSNQIQLRGSAPLELFFLDEGFGTLDSNLLEVVMDSLEKIHSERLSVGIISHLEVIKERM
PVRLIVSPAEAGVGGSKVKLEIS
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccataagagttagaattaaaggattaaacagctttgagaatgaacaggagatt
aattttgaaaaactaacaaagagaggactatttggaatctttggacctactggaagtgga
aagacgacaatacttgattcaataaccttatcactttacggggaagtggcaagaaaaagt
tcaaactttatgaatacgaattgtaatagccttaacgtaagctttgaatttcagatatca
ggaaaagaaataaaaagatatttagtggaaagagaatttagaagagataataaaacagga
agtgttagaagtaagtcagctaaaattgttgatattacaggggatgaggttgaagtttta
gaagaaggagctaaaagtgtaaatgaaaagtgtcaggaaataattggactgagcttagat
gattttacgagaactgttgtacttcctcaaggaaagtttagcgaatttctaaaacttgaa
ggaaaagaaagaagaaatatgcttgaaagactatttaatcttcaggaatacggggatgag
ctttcttttaaattagctagaaaaataagaaaagaaagagaaaaggaaaatgttttagta
ggagaattaaagggatatgaaaatataaatgaagatgttctaaaggaaagaagagagctt
ttgaaagaaaataatgatttctttaatgaagcttcaaaggagtatctaaaggcagaagag
gaatacaatgaaggaaaagaggtttggggtcttcaaattgaaatagaggaaaaaaataga
gttcgtaaagatcttatggagaaaaaagatgaaatagacttaaaggaaaaaagagcccgt
ttaggtgaaagttcgtcgaaggttaagccttacattgataattatgaaaatactttaaaa
caaattgatatattaaaagaacaaatcctttctcgtgagaacacaatgaaagctataagc
ttggaaaaagaggacatggagaaaaaattaagtattgcaaaggataataaggaaaaagca
cttcctaagtttatgattaaacatcacattatattagatgcaataaaagaaaaagatctt
ttggataatataaagcttgaaaagaaaaggctccaaggaaaaatagaaaagcttagttta
gaggcgagtaacaaagaagaattaataaaacagaacataaaagatatagactcattaact
ttgaaaatacagaatttggagagtaagattgataatcttaaggttccagaagaatataaa
aataaaattaatgaaggaatatttttattgaggaattatgatgaaaaattaaaacataaa
aataagcttggacttgattgtgataaatttcaagttgattttgaaaaagctaaaagtaaa
aaagaaatgctttttaataagttagaggaagagagaagtaaattagatacatacacaaaa
aagcttcaggatttaaataaggactttcctaaagatgatgtacttcttacatttcaagaa
aaattaaatgattctaggcaaaaatgggctaagtatagtgagtataatgaaagcttaaag
gcaagcttaagggttgtagaaaattcagagcaagttctaagaaccaaaaaagaggaaatg
acaaaattagaggataaaatatcaaaagttaatattaaaatagagtctttagagacggaa
aacatggctcatgtacttagagaaaagcttaagagtggagaggcatgtcctgtatgtggt
tctgtgcatcatataaaagaaggatttaaggaagttgacctaaaggctttggaaacactt
aagagtgagctcgaaggctttgaaaaaaaacgtaagtttgaaaatgaagaaatagttatg
tgtgaagctagcattaaagtagaagaaaaaaatattaaaaagcttaatgagagcataaat
aaccttggagaagagtttaaagaagtttctcttgaaagtatggaaaagaaatttaattat
ttaaaggagaaagtaaacaaatttaatttagaaaaaatacaacttgatgataatataaag
gacttaagtgaacgctcaaataaaattgaagttgaatatcagaaggaaaagacagttgaa
aagcagtgtgaaaaacgtattgtagatttaaaaagcgaattggaagaggctattaaagaa
tttaatgaagtagcatatacaatagaaaatttaaaagctgaactaaagattcaagatttt
aaatttgaaatgaaagaaatattggaaaaggaaagagtaagggtagaggcagaaggtgaa
ataaaggatctaagaaaccttttaaacataagacacacagaaaaagagcagctaatggat
aagtgtagtagactaaaggaggagcttagcaaaaataaagctgagcttaaggaaaaagat
aaaataataaacgagaaaatagaactaataaaaaataaagtaggagtattagataattta
tacgaacttaaagaaaagatagagggtacaattaaaaaaattgaagaacagtataattta
tgtgataagaaaatgaatgaaattgaggacaaatacagaaagtgtagtgatgaaataata
aagtatcacagtaatttgtccagtctcaaggataggaaagttaatgatatagacaaatta
aataaaatacttatggaagaaaaatttgaaaatatagagaaagctaaggaaaattatcta
aacgataaagaaataaatttgcttaaaagcgatgttgaaaagtataaaaatgaactttca
aaggtaaatggagctgtggaggttttaagcaagaagcttaagaatagaaaattaacggaa
gaaaagtggatagaaattcaaaataatagagttgagaaagcttccaaggcaaaagcgctt
caagaaagaagtataaaacttgaggaagaggttaaaaacatagaaataaaacttaaggaa
cttgggaaacttcttaaaactaagcaagagttagaacataaattaagtcttttagatgat
cttgaaaaattatttaagggtaaaaaatttgttgaatttgttgcattaaatcagcttaaa
tatatatcaatagaagcttcaaaaagattaaaggaaatcactggtggaaattacggactt
gaagtagatgataatggaaagttcattataagggattataaaaatggaggagctaaaaga
gatgcttcaactttgtcagggggagagacttttgtaacctccttagcgctggcgctttct
ctttcaaatcaaatacaactaaggggaagtgcaccacttgaattatttttcctggatgaa
ggttttggaactttagacagcaaccttcttgaggtagtaatggattcgcttgaaaaaata
cacagtgaaagactttctgttggaataataagtcaccttgaagtaataaaagaaaggatg
ccagtaaggctcatagtaagccctgcggaagctggagttggaggaagtaaagttaaactt
gaaataagctaa
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