Corynebacterium argentoratense: CARG_01970
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Entry
CARG_01970 CDS
T02821
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
caz
Corynebacterium argentoratense
Pathway
caz03420
Nucleotide excision repair
caz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
caz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CARG_01970
03430 Mismatch repair
CARG_01970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caz03400
]
CARG_01970
Enzymes [BR:
caz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CARG_01970
DNA repair and recombination proteins [BR:
caz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CARG_01970
MMR (mismatch excision repair)
Other MMR factors
CARG_01970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-GeneID:
16729181
NCBI-ProteinID:
AGU14563
UniProt:
U3GVR0
LinkDB
All DBs
Position
390609..394088
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AA seq
1159 aa
AA seq
DB search
MSTKPQVDPVTLSQWLGQEHPPTPQQAAIIGAPPGPMLVVAGAGAGKTETMAARVVWLVA
NGYCAPEQVLGLTFTKKAAQQLSQRIRLRLQALARVPQLAEIDPDGSIRDSLKAITPTVA
TYDSYAATLIQEYGLLLPVEPGARTITQAETYHIALEVVRQHQGTLDTTVLPGSLVNRVL
RLASEMDNHVVSSQEVIDESRLLVEMVDTLPNKDPDGPTPGKPNQALLKVRDRQLDRNAL
LPIVEEFRAELKRRAVVTFGEQMSMAARLVMSHPRVGASQRERYRVVMLDEYQDTSHSQR
LLLRSLFGGIDPELSVTAVGDPMQAIYGWRGATAANLPRFTRDFPDITAGTPAPKKELTT
SWRNPPAVLDWANIVADAVFGTGAPRPVQPLQARPGSAPGHTDLRWFATPEEEVQWVADH
MAQRYADGVGAGGFTGAVLVRKRAHMRSVADALRARGVPVEIVGDAGLLKIPEVADMLAV
ATMLIRPEDTEAALRVVCGPSVGLSLADLQALAARAKNLSARVSADDDAAGKAQAPDLDA
AGRIVSHLREQIDGAVSQEPEARVGLADAVADLGEPERFSVEGYARLQDLAAALRYMRTH
TLSQSLPDIFNDIERVMGIRTEVLSRANPHEDGAAGTAHLDAFATVVADFSRIPGASLES
FLDYVQLATEHEDGLAPGEVQVRADRVQILTVHKSKGLEWDHVAVLHADNSTYFADGSRP
GAKHSNWTTSVDQLPVSLRGDCEEPGDTPGTGIPELDLSDVTTLNELSAAIEQHKKDYHA
ELREADRRLFYVALTRAADSLTISGNWQMGAPIDLVARLAKLNPAEDEQWTVPDKPKLPM
GLRDALSILGEDDTPEETPLNPKLIPIAVQRRLAQRDVIIPSRPLEDLDESIGSYPRDHL
GQRREHVEHGAGLVAEALDNLPEATAEAELDQLWEQEATALIDEHTRLNQPVTHVDIGTR
LTASDMVSLKDDPERFARRLRRPVPFKPNSYAKRGTALHQWLEDRFGGSGLIDEDDLPGM
GELYEDPHADNLQELKDKFLASKWAARTPMYVEHPFEVKIGTHLVRGRIDAIFKDEDGWL
VLDWKTGKPPRARSTKEMEAAIIQLAVYRQAWAQLLSERSGQPVSPLGIRAAFHYIAWDE
TFTPNELPDAEALAAMLEA
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtccactaagccacaggtcgatccggtcactctgtcccagtggttgggtcaagagcat
ccccccacaccccaacaagcggcgattattggcgcgccacccggccccatgcttgtcgtc
gctggcgctggcgctggcaaaaccgaaacgatggccgcccgcgtcgtctggctagtcgcc
aacggatattgcgcgccagaacaagtgctgggcctgaccttcaccaaaaaggcagcccag
cagttatcccaacgaatcaggctgcgcctccaagccctggcacgggtaccccaattggcg
gagattgaccccgatggatctatccgggacagcctcaaagccatcaccccaaccgtcgcc
acctatgattcctacgcagcaacactcatccaggaatacggcctgctgttgcccgtagaa
cccggcgctcgaaccatcacccaagccgagacctaccacatcgccctggaagtagtgcgc
caacaccaaggcacactcgacaccaccgtcctgcccggatcactggtcaaccgagtactg
cgtctagccagcgaaatggacaaccacgtggtcagctcgcaagaggtcatcgacgaatcc
cgcctcctggtggagatggtcgacaccctccccaacaaagaccccgacgggcccacaccc
ggaaaaccaaaccaagccctgctgaaagtaagggaccggcagcttgaccgcaacgcgctg
ctacccatcgtcgaagaattccgcgcagaactgaaacgccgtgcagtggtgaccttcggc
gaacaaatgtccatggcggcccgcctagtcatgtcccacccgcgcgtcggagccagccaa
cgcgaacgctaccgcgtggtcatgctggacgaataccaagacaccagccactcccaaagg
cttctcttgcgtagtctcttcggcggcatcgaccccgaactgagcgtcacagccgtaggt
gaccccatgcaggccatctacggttggcgcggcgccacagcagccaacctcccccgattt
accagggacttcccagacataaccgccggcacaccggcacccaaaaaagagctcaccacc
tcctggcgaaacccaccagcagtactcgactgggccaacatcgttgccgacgcagtcttc
ggcaccggtgcaccccgccccgtacaacccctccaagcccgccccggcagcgcgccgggc
cacacggatctacgctggttcgccaccccagaagaagaagtgcagtgggtggctgaccac
atggcgcagcgctacgcggatggtgttggcgccggtggttttacgggggccgtgttggtc
cgcaagcgcgcccatatgcgcagcgtggctgatgcgttgcgcgctcgtggagtacccgtc
gaaatcgtcggtgacgccggtttgcttaagatcccggaagttgcagacatgctggcggtg
gccaccatgctcatccgacccgaagacaccgaggctgcactgagggtcgtatgcggaccg
tccgtaggcctgtcgcttgctgatttgcaggcattggcggcccgggcgaaaaacttgagc
gctcgagtctccgcagatgatgacgccgcgggcaaggcgcaggctcccgacctcgacgcc
gcaggacgtatcgtcagccacttacgcgagcagatcgatggggcagtgtcccaagaaccc
gaggccagggttgggctagccgatgctgtggcagacctcggcgaaccggaacgattctcg
gtggaaggctacgcgaggctccaagaccttgcggccgcactacgctacatgcgcacccac
accctcagccagtcactgcccgacattttcaacgatatcgagcgagtgatgggaatccgc
acggaagtattgtcgcgggcaaacccacatgaagatggcgccgccggcaccgcgcacctg
gatgcctttgccaccgtggtcgccgacttctcgcgtatacccggggccagccttgagtcc
ttcctggactacgttcaactggccaccgagcacgaagacggcctggcaccaggcgaggtc
caagtgcgtgcagaccgcgtgcagatactcaccgtgcacaagtcaaaaggcttggaatgg
gaccacgtcgctgtgctgcacgccgacaactccacctacttcgctgacggatcccgccca
ggtgctaaacattccaactggaccacctccgtggaccaacttcccgtatcacttcgtggc
gactgcgaagaacccggcgacacaccaggcaccggcattcctgagcttgacctcagcgac
gtcaccaccctcaacgaactgtccgccgctatcgaacaacacaaaaaggactaccacgcc
gagttgcgcgaagccgaccgcaggctgttctacgtagccctcacccgtgccgccgacagt
ctaaccatcagcggaaactggcagatgggtgcccccatcgacctggtcgcgcgactagcc
aagctcaaccccgccgaagatgaacaatggacagtacccgacaaacccaagctccccatg
gggctgcgcgacgcactgtccatcctcggagaagacgacacaccagaagaaacaccgctg
aaccccaagctcatccccatcgccgtccagcggcgcctagcccaacgcgacgtcattatt
cccagtcgcccgcttgaggacctcgacgaatccatcggcagctaccccagggaccaccta
gggcagcgacgcgaacacgtcgagcacggcgcaggactagtcgccgaagcactggacaac
ctcccagaggccacagccgaagccgaactcgaccagctgtgggaacaagaagccaccgcg
ctcatcgacgaacacacccgcctgaaccaaccagtaacccacgtagacatcggaaccagg
ctgaccgcatccgacatggtgagcctcaaagacgaccccgagcgcttcgcccgccgccta
cgccgacccgtgccattcaaacccaacagctacgcaaaacgtggcacagcactgcaccaa
tggctcgaagaccgcttcggtggctccggactgatcgacgaagacgaccttcccggcatg
ggcgaactttacgaggacccccacgcagacaaccttcaggaactcaaagacaaattcctc
gcaagcaagtgggcagcgcgcacacccatgtacgttgagcaccccttcgaagtgaaaatc
ggcacgcacctggtgcgcgggcgcatcgacgccatcttcaaagacgaagacggctggctc
gttctcgactggaaaaccggaaaaccgccccgcgcccgcagcacaaaagaaatggaagcg
gccatcatccagctcgcggtctaccgccaagcatgggcgcaactactgagcgaacgcagc
ggacagccggtgtcccctttggggattcgggccgcattccactacattgcttgggatgaa
actttcaccccgaacgagcttccagacgccgaggcactggcagcgatgcttgaggcataa
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