Corynebacterium argentoratense: CARG_05605
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Entry
CARG_05605 CDS
T02821
Name
(GenBank) RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
caz
Corynebacterium argentoratense
Brite
KEGG Orthology (KO) [BR:
caz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caz03021
]
CARG_05605
Transcription machinery [BR:
caz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CARG_05605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_DeoR
HTH_28
Motif
Other DBs
NCBI-GeneID:
16729906
NCBI-ProteinID:
AGU15250
UniProt:
U3GUS3
LinkDB
All DBs
Position
1138261..1139283
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AA seq
340 aa
AA seq
DB search
MSAVATQTASDTESLPAVDGTEEVDRGSRRGHTNDNPSADLVRVYLNGIGKTALLSAEDE
VELARTIEVGLYAEHLLNNPGDKPLTRAKRRDLNIIAKQGRAARTHLLEANLRLVVSLAK
RYTGRGMPLLDLIQEGNLGLIRAMEKFDYTKGFKFSTYATWWIRQAITRGMADQSRTIRL
PVHLVEQVNKLSRIRREMYQHLGREATNEELAEESGIDESKIELLLRQSRDPVSLDMPVG
ADEEAPLGDFIEDSDAADAESAVVASLRHSDIRAVIDSLEQREQDVIIMRYGLDDGVPRT
LDQIGRRYGLSRERVRQIEREVMAKLRDGERADRLRAYAF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgtagcaacgcagaccgccagcgataccgagtccctacccgctgtggacggg
accgaagaggttgaccgaggcagtcggcgcggccataccaatgacaatccctctgcggat
ctcgtccgcgtctacttaaacgggatcggcaaaacagcactactgagcgcagaggacgag
gttgagctcgcccgaaccatcgaggtcggcctctatgccgaacatcttctgaacaatccc
ggtgacaagcccctcacgcgggctaagcgtcgtgatctcaacatcatcgcaaaacaaggc
cgtgcggcgcgcacccacctgctcgaagctaacctacgtttggtcgtgtcgctggccaaa
cgctacaccggccgtgggatgcctttgctggatctcatccaagaaggcaacctgggtttg
atcagggccatggaaaaatttgattacaccaagggctttaagttctctacctatgccacc
tggtggatccgtcaagctattacgcgcgggatggctgaccagtctcgaaccatccgcctg
cccgtgcacttggttgagcaagtcaacaagctgtcacgtattcgtcgcgaaatgtatcag
cacttgggccgcgaagcgaccaacgaagaactcgccgaagaatcaggtatcgacgagtca
aagatcgaactgttacttcgtcaatcgcgagatccagtgagcttggacatgcctgttggc
gctgatgaagaagcaccgcttggagatttcatcgaggactcagatgcagcggatgctgaa
tctgcggtggtcgcttccctccgccactcggatattcgggcggtcatcgattcccttgag
cagcgcgaacaagacgtcatcatcatgcgctacggactcgatgatggagttccacgcacc
ctcgaccagattggtcgccggtacggactatccagggagcgcgtccgacaaattgagcgc
gaagtgatggcgaagctccgcgatggcgagcgtgctgaccgcttacgtgcctacgctttt
taa
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