Corynebacterium argentoratense: CARG_07495
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Entry
CARG_07495 CDS
T02821
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
caz
Corynebacterium argentoratense
Pathway
caz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CARG_07495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caz03019
]
CARG_07495
03009 Ribosome biogenesis [BR:
caz03009
]
CARG_07495
Enzymes [BR:
caz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CARG_07495
Messenger RNA biogenesis [BR:
caz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CARG_07495
Ribosome biogenesis [BR:
caz03009
]
Prokaryotic type
rRNA processing factors
CARG_07495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-GeneID:
16730284
NCBI-ProteinID:
AGU15619
UniProt:
U3GWA1
LinkDB
All DBs
Position
complement(1562635..1565844)
Genome browser
AA seq
1069 aa
AA seq
DB search
MASTNPPSTAAASYDRSSIGEKTRVHQLAKQLGVQSKELISVLDGIGLVKVAQSSLSREE
VEKTLDALAPKKKARKTTKKAAGTKQKATKKTTKKAAKKAPKAAAAEVVEDSEPEKEPKK
TARRATRRRRATTQVDAEALASSVEDPADAKLVKRVAKNVENEIHQIEQKVERDLGERIT
DKADEDAEGTVWEEKDGLLHEVVPEVTPAPQSELPAVTPIFMPPEPLHSDDDDLEIHTLH
VDKDTKDTEEQSDGERPRRRGKRGAGRGRGVNIKDAPEEVTDEPTAIKGSTRLEAQRRRR
SEMREEGRKKRHIVSEAEFLARRESVKRTMLVREKQREDHAGLVTQVGVLEDGLLVEHFV
TSETQTSMVGNVYLGRVQNVLPSMEAAFIDIGKGRNGVLYAGEVDWRNAGLGGRSRKIEQ
ALKPGDPVLVQVAKDPIGHKGARLTTQISLAGRFLVYVPGGHSAGISRKLPESERKRLKQ
ILHDVVPKSGGAIIRTAAEGVHEKAIEADVNRLHSLWEQIQASVAEAKKSKSKDPVTLYE
EPDLLVKVIRDLFNEDFDELVVQGKRSWSVVRSYVSAVAPELMDRVHRFEDRDVAPAGEQ
ESDGTGHDVFKAYRVEEQLHKALSEKVWLPSGGTLIIERTEAMTVIDVNTGKFTGSGGNL
EETVTKNNLEAAEEIVRQMRLRDLGGMIVIDFIDMVLPQNQDLVLRRLKEALGRDRTRHQ
VSEVTSLGLVQVTRKRLGTGLLETFATKCEACDGRGVIIHDDPVDESSDAPPAHAPKRRR
PIREDAPKKAEKAEKSEDAQQEDKAPKAEGKRRGAGRRRASIEELVDAVIVVSDDADSAG
TQDAEAEKKDKRPARKNSRWRAGRKEEHADSAEPSISSIVSAALDVADAEDPDEPSGAQY
RPAETFEEATEQFEKSPRRRRKTRGNSRSDHAPKREDFEAKLDKADQAAEPQRAEEESKP
SDSQRRRARRAKKVSLSKREDGAKAEDKATKPEAKKPAEKEEPRRGRGRRRVVKKISSAK
QSDGQETRKQRSAAPKSEPVAPKIVAKKAERPSPSGRRRRRVVVKRSED
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
gtggcttcaactaatcccccaagcacagcggcagcatcatacgaccgcagctcaatcggg
gagaaaacccgcgtgcaccaactagccaaacagctgggtgtgcagtccaaagaactcatt
agcgtcctcgacggcatcgggctggtgaaggtcgcacaatctagcctgagccgcgaagag
gtggaaaaaaccctcgacgcgctcgcgcccaagaagaaggcccgcaaaaccaccaaaaag
gcggctggaactaagcagaaggcaaccaaaaagaccaccaagaaagctgctaagaaggct
cccaaggctgcagcggctgaggtggtcgaggacagtgaacccgagaaggaaccgaagaag
accgcacgccgtgcaacccgacgccgccgagcgaccacccaggtagatgccgaggcgctc
gctagctctgtagaagaccccgctgacgccaagctggtcaagcgcgtcgcgaagaacgtg
gaaaacgaaatccaccaaattgaacagaaggtggaacgcgacctaggcgaacgcatcacc
gacaaggccgacgaagacgccgagggcacagtctgggaggaaaaagacggcctgctacac
gaggttgttccggaagttaccccggcgccgcagtcagaactgccagcagtcacccccatt
ttcatgccgccggaacccctgcactccgacgatgatgacctagaaatccacaccctccac
gtagacaaggacacaaaggacacagaggaacagtccgacggtgagcgcccgcggcgccgt
ggcaagcgtggggcaggtcgcggacgcggcgtcaacattaaagatgcgccggaggaagta
accgacgaacccaccgcaatcaagggttccaccaggttggaggcccagcgccgccgccgc
agcgaaatgcgtgaagaaggccgcaagaagcgccacatcgtgtccgaggcggaattccta
gcgcgccgcgaatccgtcaagcgcaccatgctcgtgcgtgagaaacagcgtgaagaccac
gcgggcctggttacccaggtgggtgtgcttgaagacgggttgttggtcgagcacttcgtt
accagtgaaacccaaacctcgatggtgggcaacgtctacctgggacgcgtgcaaaatgtg
cttcccagcatggaagccgccttcatcgacatcggcaagggtcgcaacggtgtgctgtat
gccggtgaggttgattggcgtaacgcgggcctcggcggccgttcccgcaagatcgagcag
gcgttgaagcccggcgacccagtgctcgtgcaggtcgctaaagaccccatcggccacaag
ggtgcgcgcctaaccacccagatttccttggcgggacgcttccttgtgtacgtgcccggc
ggccacagcgctggtatttcccgcaagcttcccgaaagtgagcgtaagcggctgaagcag
attctgcatgacgtcgtgccgaaatccggtggcgcgatcattcgtactgcggcagagggt
gtccacgaaaaggccattgaagcggacgtcaaccgcctgcactctttgtgggagcagatc
caggcgtcggtggcggaagcgaagaagtccaagtctaaagaccccgtcaccttgtatgaa
gaacccgacctgttggtcaaggttattcgcgacctcttcaacgaggacttcgacgagctc
gttgttcagggcaagcgctcctggagcgtcgtgcgttcctatgtgtcagcagtggcgccc
gaactaatggatcgcgttcatcgctttgaggatcgtgacgtagcccccgcaggggagcaa
gaatccgacggtacaggacacgatgtctttaaggcctacagggtagaggagcagctccac
aaggcactctcggagaaggtatggttgccttccggtggcacgttgatcatcgagcgtacc
gaggcgatgaccgtcatcgacgtcaataccggtaaattcaccggatccggcggcaacctt
gaggaaacggtcaccaagaacaacctcgaggctgcggaagagatcgtccgccagatgcgt
ctgcgcgaccttgggggaatgatcgttatcgacttcatcgacatggtgctgccgcaaaac
caagatcttgtgctgcgccggctcaaagaggccctgggtcgcgaccgcacccgccaccaa
gtgtccgaagtgacttccctaggcttggtgcaggttacccgtaagcgcctgggcacaggc
ttgctggaaaccttcgcaaccaagtgcgaagcgtgtgatggacgcggcgtcattattcat
gatgatcctgttgatgagtccagcgatgcaccgccggcacacgccccgaagcgtcgtcgg
ccgatccgcgaggacgcacctaagaaggcagagaaagcagagaagtcggaagatgctcag
caggaagacaaggcgccgaaggctgagggcaagcgccgtggggcgggtcgccgccgcgca
agcattgaagagcttgttgatgcagtcatagtggtcagcgatgacgctgacagtgccggg
actcaggatgcggaggcagagaagaaggacaagcgtcccgctcgcaagaacagccgctgg
cgcgcaggtcgcaaggaagagcacgccgactcagctgagccgagcatcagcagcattgtg
tcggccgcgctggatgtggctgacgcggaagaccccgatgagcctagtggtgcgcaatac
cgcccggctgagaccttcgaggaagccaccgagcagtttgaaaagtccccccgcaggcgt
cgtaagacccgcggcaactcccgctctgatcacgcacccaagcgtgaggacttcgaagcc
aagctggacaaggccgaccaggcagcagaacctcagagggcggaggaagagtccaagcct
agtgactcccagcgccgtcgtgctcgccgcgccaagaaggtgtctttgagcaagcgtgag
gatggtgccaaggccgaggacaaggcgaccaagccagaggcaaagaagcctgcggagaag
gaagagccacgccgtggtcgtggccgccgccgcgtggtgaagaagatctccagtgctaag
caatcggacggccaggaaacgcggaagcagaggtcggcagctccaaagtccgagcccgtt
gcaccgaagattgttgcgaagaaagccgagcgccctagcccctctgggcgtcgccgtcgc
cgcgttgtcgtcaagcggagcgaagactag
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