Corynebacterium argentoratense: CARG_09540
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Entry
CARG_09540 CDS
T02821
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
caz
Corynebacterium argentoratense
Pathway
caz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
caz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CARG_09540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caz03400
]
CARG_09540
Enzymes [BR:
caz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CARG_09540
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CARG_09540
DNA repair and recombination proteins [BR:
caz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CARG_09540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-GeneID:
16730694
NCBI-ProteinID:
AGU15999
UniProt:
U3GXB5
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All DBs
Position
1995821..1996630
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AA seq
269 aa
AA seq
DB search
MPEGHVIHRLARDINNNFAGHHVRVTSPQGRFATEAAQLDGCELTQAVAVGKHLFICFDA
PWAIHIHLGLVGKFHFTHGEPRGVVRLRIGLEDTDTYADLKGPQWCRLITAASIPDIADT
LGADPILGGPPERRDAVLQQVARSKRTAASVLMDQKLFAGVGNIYRAETLFRLGIDPMTP
SREIDAPTWRDIWDDLETLMRAGVDAGRIDTVRPEHTPDAMGRPPRKDDHGGEVYVYRRA
GDPCYICGTPIEHSVIEGRNLFWCPTCQH
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaggacacgtcatccaccggctcgcccgcgacatcaacaataatttcgcaggc
caccacgttcgcgtcacctcaccccaagggcgcttcgcgacagaagcagcccaactcgat
gggtgcgaactcacccaggccgtcgccgtcggcaaacacctgttcatctgcttcgacgcg
ccctgggcaatccacatccacctcggcctggtcggcaaattccacttcacccacggcgag
ccccgcggcgtcgttcgtctacgcatcggcctcgaagacaccgacacctacgccgacctc
aaaggaccacagtggtgccggctgatcaccgcggcgtccatacccgacatcgccgacacc
ctaggcgccgaccccatcctcggaggcccacccgaacgccgcgacgccgtcctccaacaa
gtcgcacgctccaaacgcacagcagcgagcgtgctcatggaccagaaactcttcgccggc
gtcggaaacatctaccgcgccgaaaccctcttccgcctaggcatcgaccccatgaccccc
agccgagaaatcgacgcacccacctggcgtgacatctgggacgacctcgaaaccctcatg
cgcgcaggcgtcgacgccggccgcatcgacaccgtccgacccgaacacactcccgacgcc
atgggacgaccaccccgcaaagacgaccacggcggggaagtctacgtctaccggcgggca
ggcgacccctgctacatctgcggcacccccatcgaacacagcgtcatcgaaggacgcaac
ctcttctggtgccccacctgccaacactaa
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