Caloranaerobacter azorensis: G3A45_05865
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Entry
G3A45_05865 CDS
T06467
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cazo
Caloranaerobacter azorensis
Brite
KEGG Orthology (KO) [BR:
cazo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cazo03009
]
G3A45_05865 (rlmD)
Enzymes [BR:
cazo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
G3A45_05865 (rlmD)
Ribosome biogenesis [BR:
cazo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
G3A45_05865 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_15
Cons_hypoth95
TRM5-TYW2_MTfase
MTS
Methyltransf_25
PrmA
FtsJ
Methyltransf_11
N6_N4_Mtase
Methyltransf_12
Methyltransf_4
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
QIB26859
UniProt:
A0A6P1YC27
LinkDB
All DBs
Position
1081397..1082758
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AA seq
453 aa
AA seq
DB search
MSVIKLNEIYEVKIEDINHKGQGVAKIEGFTVFIDGGLPGDKCKVKLINIKKNYGVGEIV
SIIEPSTKRVIPKCKISYACGGCQIQGLDYQEQLKIKTNKVKNDIKKIGHLEDVVIHDTL
GMDNPYRYRNKAQFPVGRKNKKTAIGFYKRGSHEIVDTNSCIIQHEVNDKIIKLIKAYMK
TYNIKPYDEKTGTGLIRHILTKTAFKTGDVMVVIITNGEKLPYKDKLIEILKNNITNLKS
VIQNINTKKTNVILGDKTNVLFGTKKIIDYIGDLKFNISAKSFFQVNPVQTEVLYNKALE
YAKLEGNEIVFDLYCGIGTISLFLAKKAKKVYGIEVVKEAIVDAMENARINSIENVEFYE
GTAEEIFPKLYNHGIKADVVVVDPPRKGCDKKVLDTIVKMSPKRVVYVSCNPSTLARDLK
YLYEKGYKTIEIQPVDMFPHTMHVECVVKIEKK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtaattaaattaaatgaaatatatgaagtaaaaatagaagatattaatcataag
ggacagggagtagctaaaatagaagggtttacagtatttatagatggaggattaccagga
gataaatgcaaagttaaactaattaatattaagaaaaattatggagttggagaaattgta
agtataatagaaccttcaacaaagagagttatacctaaatgtaaaattagttatgcttgt
ggaggttgtcaaatacaaggacttgattatcaagagcaattaaaaataaaaactaataag
gttaaaaatgatattaaaaagattgggcatttagaagatgttgtaatacatgatacttta
ggtatggataacccttatagatatagaaacaaagcacaattccctgtaggaagaaaaaat
aagaagacagcaataggtttttataaaagaggaagccatgaaatcgttgatactaattca
tgtattatacaacatgaggtaaatgataagataataaagttaattaaagcatatatgaaa
acatataacataaagccttacgacgaaaaaacaggaacgggtttaattagacatatactc
acaaaaactgcatttaaaacaggagatgtaatggttgttattataacaaatggtgaaaaa
ctaccatataaggataaactaattgaaattcttaaaaataatataacaaatttaaaaagt
gtaatacagaatataaatactaaaaagactaatgttattttaggagataaaactaatgtg
ttatttggcacaaaaaaaattatagattatataggagatttaaaatttaatatatcagca
aaatcattttttcaagtaaatccagtgcaaacagaagtgctttataacaaggctttagag
tatgcaaaacttgaaggaaatgaaatagtatttgatttatactgtggcataggaacaatc
tcgctatttttagccaaaaaagcaaaaaaagtgtatggaattgaggttgtaaaggaagct
atagttgatgctatggaaaacgctaggataaatagtattgaaaatgttgagttttatgaa
ggtacagcagaagaaatattcccaaagctatataatcatggtataaaggcagatgtagtt
gtagttgatccacctagaaaagggtgcgacaaaaaagtattagatacaatagttaaaatg
tcgcctaaaagagtcgtttatgtatcgtgtaatccatctacattggcaagagatttaaaa
tatttatatgaaaaaggatataaaactattgaaatacagccagtagacatgtttccacat
accatgcacgttgagtgcgtggtgaagatagagaagaaatag
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