Cereibacter azotoformans: LV780_00025
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Entry
LV780_00025 CDS
T07975
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cazt
Cereibacter azotoformans
Brite
KEGG Orthology (KO) [BR:
cazt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cazt03032
]
LV780_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
cazt03400
]
LV780_00025 (gyrB)
Enzymes [BR:
cazt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LV780_00025 (gyrB)
DNA replication proteins [BR:
cazt03032
]
Prokaryotic type
DNA Topoisomerases
LV780_00025 (gyrB)
DNA repair and recombination proteins [BR:
cazt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LV780_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
GyrB_insert
HATPase_c_3
Tox-PL-2
Motif
Other DBs
NCBI-ProteinID:
UIJ30604
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Position
1:4266..6701
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AA seq
811 aa
AA seq
DB search
MAEAARVPEEYGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAG
HATAVTVKIHADSSVSVRDNGRGIPVDMHASEGVSAAEVIMTQLHAGGKFDQNSYKVSGG
LHGVGVSVVNALSDWLELRIWRNGKEHFARFENGETVEHLRVVRDAPGEKGTEVRFLAAA
KTNRPDGTFSNLDYSFKTLENRLRELAFLNSGVRILLEDERPAEPLHSELFYEGGVREFV
RYLDRSKSPVMPEPIFITGERGGIGVEIAMWWNDSYHETVLPFTNNIPQRDGGTHLAGFR
GALTRTITKYAQDSGIARREKVDFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVR
PAVENLVNEKLAEWFEENPAAAKGIVGKIVEAALAREAARKAREMTRRKTAMDVASLPGK
LADCQEKDPALSELFIVEGDSAGGSAKQGRARKNQAVLPLRGKILNVERARFDRMLSSET
VGTLITALGAGIGRDEFDIGKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPAIIEGGF
LYIAQPPLYKVARGKSEVYLKDQAALDDYLIQQGIEGAILRLATGEEIAGQDLLRVIEGA
RQFRRVLEGFPTHYPRNILEQAALSGAFDPGRADDDLQLVADRVAERLDLTAAEYERGWK
GRITQDHGIRLSRVLRGVEELRTLDGAVLRSGEARRLSQVSGQTRDVYAPGARLVRKDRE
QPIHGPIALLKAVLAEGEKGLSLQRYKGLGEMNPEQLWETTLDPEARTLLQVKVEDLAEA
DDIFTKLMGDVVEPRREFIQQNALNVENLDT
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagctgcccgcgtgccggaagagtatggcgccgattccatcaaggttctcaag
gggctggaggctgtccgcaagcgtcccggcatgtatatcggcgacacggacgatggctcg
ggcctccaccatatggtttatgaggtggtggacaacgggatcgacgaggcgctggcgggc
cacgcgaccgctgtgacggtgaagatccatgccgacagttcggtgtccgtgcgcgacaac
gggcgcgggatcccggtggacatgcatgcctccgaaggcgtgtcggcggccgaggtcatc
atgacccagctccatgccgggggcaaattcgaccagaacagctacaaggtctcgggcggc
ctgcatggcgtgggcgtctcggtggtgaacgccctgtccgactggctcgaactgcgcatc
tggcgcaacggcaaggagcatttcgcccggttcgagaacggcgagacggtagagcatctg
cgcgtggtccgcgacgcgccgggcgagaagggcaccgaggtgcgcttcctcgccgcggcc
aagaccaaccgacctgacggaaccttctcgaacctcgactacagcttcaagacgctcgag
aaccgcctgagggagcttgccttcctcaactccggtgtccgtatcctgctcgaggacgag
cgccctgcggagccgctgcacagcgagctgttctacgagggcggcgtgcgcgagttcgtc
cgttatctcgaccgatcgaagagcccggtgatgcccgagccgatcttcatcacgggcgag
cgcggcgggatcggggtcgagatcgcgatgtggtggaacgacagctaccacgagacggtg
ctgcccttcaccaacaacattccgcagcgtgacggcggcacccaccttgcgggcttccgg
ggcgcgctgacgcggaccatcaccaaatatgcgcaggacagcgggatcgcccggcgcgag
aaggtggatttcaccggcgacgacgcgcgcgaggggctgacctgcgttctgtcggtcaag
gtgccggaccccaagttctccagccagaccaaggacaagctggtttcgtccgaggtgcgc
ccggcggtcgagaacctcgtgaacgagaagctcgccgagtggttcgaggagaacccggcc
gccgccaagggcatcgttggcaagatcgtcgaggcggcgctggcgcgcgaggcggcgcgc
aaggcccgcgagatgacccggcgcaagaccgcgatggacgtggcctcgctccccggcaag
ctggccgattgccaggagaaggacccggcgctgtcggaactgttcatcgtcgagggggac
tcggccggcggctcggccaagcaggggcgcgcgcggaagaaccaggcggttctgccgctc
cggggcaagatcctgaacgtggagcgcgcgcgcttcgaccggatgctgtcctcggaaacc
gtgggcacgctgatcaccgcgctcggcgcgggcatcgggcgcgacgagttcgacatcggc
aagctgcgctaccacaagatcatcatcatgaccgacgcggacgtggacggcgcccatatc
cgcacgctgctgctgaccttcttcttccggcagatgcccgccatcatcgaggggggcttc
ctctacatcgcgcagccgccgctctacaaggtcgcgcgcggcaagtccgaggtctacctc
aaggaccaggcggcgctggacgattacctgatccagcaggggatcgagggggccatcctg
cggctggcgacgggcgaagagatcgccgggcaggacctgctccgcgtgatcgagggcgcg
cgccagttccgccgcgtgctggagggtttccccacgcattacccgcgcaacatcctggaa
caggcggccctttcgggggcgttcgatccgggccgggccgatgacgatctgcaactcgtg
gccgaccgtgtggccgagcggctggatctgacggccgcggaatacgagcgcggctggaag
ggccggatcacgcaggaccacggcatccgtctgtcgcgcgtgcttcgcggggtggaagag
cttcggacgcttgacggggccgtgcttcggtcgggtgaggcgcggcgtctgtcgcaggtc
tcgggccagacgcgcgatgtctatgcgccgggggcgcggctcgtccgcaaggaccgcgag
cagccgatccacgggccgatcgcgcttctgaaggcggtgctggccgagggcgagaagggc
ctgtcgctccagcgttacaagggccttggcgagatgaacccggagcaactctgggaaacc
acgctcgaccccgaggcgcgcacgctgctgcaggtcaaggtcgaggatctggccgaggcc
gacgacatcttcaccaagctgatgggcgacgtggtcgagccgcggcgcgagttcatccag
cagaacgcgctgaacgtcgagaatctggacacctga
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