Cereibacter azotoformans: LV780_03440
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Entry
LV780_03440 CDS
T07975
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cazt
Cereibacter azotoformans
Pathway
cazt03410
Base excision repair
cazt03430
Mismatch repair
cazt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cazt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LV780_03440 (recJ)
03430 Mismatch repair
LV780_03440 (recJ)
03440 Homologous recombination
LV780_03440 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cazt03400
]
LV780_03440 (recJ)
DNA repair and recombination proteins [BR:
cazt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LV780_03440 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LV780_03440 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LV780_03440 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
UIJ31245
LinkDB
All DBs
Position
1:complement(692576..694327)
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AA seq
583 aa
AA seq
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MTGPAARAFLGVEASATGRRWVGPSPEEDRLAEAMAQTTRLPLALCRTLVRRGVPPTEAE
SFLAPALRDLLPDPLTLKDMAPAAARLLQAVARREKIAIFADYDVDGGSSAALLIVWLRA
MGRAATLYIPDRIDEGYGPNVPAMQALAAAHDLILCVDCGTLSHEPIAAATGADVVVLDH
HLGTETLPPALAVVNPNRQDEDGSLGHLCAASVVFLLLVEANRRLRAEGVQGPDLMAMLD
LVALATVADVAPLTGVNRALVRQGLKVMARRERPGLVALADVSRMNSAPNCYALGFLLGP
RVNAGGRIGQADLGARLLATDDPREAAALAERLDQLNTERREIEARVREEALAQAEARGT
SGPLVWAAGEGWHPGVVGIVAARLKEATNRPAIVIGLENGIGKGSGRSISGVDLGAAVHR
VAHEGLLLKGGGHRMAAGLTVEEGRLGAAMERLSDLLARQGAASAGPADLRLDGVLMPSA
ATAAFVEQIESAGPYGAGAAAPRFALASQRVVTRRMGEKHLRLTIGGAEGRLEAVAFGCF
DGPLGPLLEGGGAGLFHLAGRLEIDTWGGSARVQMRLEDAARA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtccggcggcgcgtgcgtttctgggggtcgaggcctccgcgaccgggcgccgc
tgggtcggcccctcccccgaggaggaccggctggccgaggcgatggcgcagaccacgcgc
ctgccgctcgcgctctgccgcactctggtgcggcggggtgtcccccccacggaggccgag
agcttccttgcgcccgcactgcgcgacctgctgcccgatcccctcacgctgaaggacatg
gcgcccgccgccgcgcggctcctgcaggccgtggcgcggcgcgagaagatcgcgatcttc
gccgattacgacgtggacggcggctcctcggccgcgctgctgatcgtctggctgcgggcg
atggggcgcgcggccacgctctacattcccgaccggatcgacgagggctatggcccgaac
gtgcccgccatgcaggcgctggccgcggcgcacgacctgatcctctgcgtcgattgcggc
accctctcgcacgagccgatcgcggcggcgacgggagcggatgtggtggtgctcgaccac
catctggggaccgagaccctgccccccgcgctcgccgtggtgaacccgaaccggcaggac
gaggacggcagcctgggccatctctgcgccgcgtccgtggtctttctcctgctggtcgag
gccaaccgccgcctgcgcgccgagggcgtgcaggggcccgatctgatggcgatgctcgac
ctcgtggcgctagccaccgtggccgacgtggcgccattgacaggcgtcaaccgcgccctc
gtgcggcagggcctgaaggtcatggcgcggcgcgagcggccgggcctcgtggcgctggcc
gatgtctcgcgcatgaacagcgcgccgaactgctacgccctgggcttcctgctcggaccg
cgtgtcaatgccggtggccgcatcggacaggccgacctcggcgcgcggcttctcgccacc
gacgacccgcgcgaggctgcggcgctggccgagcggctcgaccagctcaacaccgagcgg
cgcgagatcgaggcccgcgtgcgcgaagaggcgctggcccaggccgaggcgcgcggcacc
tccggccccctggtctgggccgcgggcgagggctggcatccgggcgtggtggggatcgtc
gccgcccgtctcaaggaagcgaccaaccgcccggccatcgtgatcggcctcgagaacggg
atcggcaagggttcgggtcgctccatatccggggtggatctgggcgccgcggtgcatcgc
gtggcgcatgaggggctcttgctgaagggcggcgggcaccggatggccgcgggcctcacg
gtcgaggaagggcgtcttggcgcggcgatggaacggctctcggaccttctggcgcggcag
ggtgcggcctcggcggggccggccgatctgcggctcgacggggtgctgatgccgtcggcc
gccacggccgcctttgtcgagcagatcgaatccgcgggcccctacggcgcgggcgccgcc
gccccgcgcttcgccctggccagccagcgcgtcgtgacccggcgcatgggcgagaagcac
ctgcgcctgaccatcggcggcgccgagggccggctggaggcggtggccttcggctgtttc
gacggcccgctcgggccgcttctggaaggcggcggcgcaggcttgttccatctggcgggc
cggctcgagatcgacacctgggggggcagcgcgcgggtgcagatgcggctcgaagatgcc
gcacgcgcgtga
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