Cereibacter azotoformans: LV780_04585
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Entry
LV780_04585 CDS
T07975
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cazt
Cereibacter azotoformans
Brite
KEGG Orthology (KO) [BR:
cazt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cazt03009
]
LV780_04585 (rimO)
Enzymes [BR:
cazt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LV780_04585 (rimO)
Ribosome biogenesis [BR:
cazt03009
]
Prokaryotic type
ribosomal protein modification factors
LV780_04585 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UIJ32036
LinkDB
All DBs
Position
1:complement(924214..925587)
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AA seq
457 aa
AA seq
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MGAMAQNPPNLRPDLAPRLVIDSPRREGQPTIGMVSLGCPKALVDSERILTRLRAEGYAI
SPDYAGADAVIVNTCGFLDSAKAESLEAIGEALRENGRVIVTGCLGAEPDYITGAHPKVL
AVTGPHQYEQVLDAVHGAVPPAPDPFVDLLPATGVRLTPRHFSYLKISEGCNHSCRFCII
PDMRGRLVSRPERAVLREAEKLVEAGVRELLVISQDTSAYGTDWKGPVRFPILPLARELG
QLGAWVRLHYVYPYPHVRELIPLMAEGLILPYLDIPFQHAHPEVLKRMARPAAAARTLDE
IAAWRRDCPDITLRSTFIVGYPGETEEEFQTLLDWLDEAQLDRVGCFQYENVAGARSNAL
PDHVAPELKQERWERFMQKAQAISEAKLAARIGQRLEVIVDEVDGEGATCRTKADAPEID
GNLFIDEGFEALSPGDLLTVEVEEAGEYDLWGRPVLA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgatggcccagaacccacccaacctccgccccgatctcgcgccccgactggtg
atcgacagcccccgccgcgaggggcagccgaccataggcatggtctcgctcggctgcccc
aaggcgctcgtggacagcgagcggatcctgacgcggctgcgcgcggaaggttatgcgatc
tcgcccgattacgcgggggcggatgcggtgatcgtgaacacctgcggctttctcgacagc
gccaaggcggaaagtctcgaggcgatcggtgaggctctgcgcgagaatggccgggtgatc
gtcaccggctgcctcggcgccgagcccgattacatcacgggcgcgcaccccaaggtgctg
gccgtgaccggtccgcatcaatatgagcaggttctggatgcggtgcatggcgcggtgccc
cccgcgccggacccgttcgtggatctcctgcctgcgacgggcgtgcggctgacgccccgg
catttcagctacctgaagatttcggagggctgcaatcacagctgccgcttttgcatcatt
cccgacatgcgcggccgcctcgtgagccggcccgagcgcgcggtgctgcgcgaggcggaa
aagctggtggaggccggggtgcgcgagcttctggtcatcagccaggacacgagcgcctat
ggcaccgactggaagggccctgtgcgttttccgatcctgccgctcgcgcgcgagctgggg
cagctcggcgcctgggtgcggcttcattatgtctatccctatccccatgtgcgagagctg
atcccgctgatggccgaggggctgatcctgccctatctcgacattcccttccagcacgcc
cacccggaggtcctcaagcgcatggcccgcccggccgctgcggcgcggacgctcgacgag
atcgcggcctggcggcgcgattgcccggacatcacgctgcgctcgaccttcatcgtgggc
tatccgggcgagaccgaggaggagttccagacgctgcttgactggctcgacgaggcgcag
ctcgatcgcgtgggttgctttcagtacgagaatgtcgcgggggcgcgttccaatgcgctg
cccgaccatgtcgcgcccgagctcaagcaggaacgctgggagaggttcatgcagaaggcc
caggcgatctcggaggcgaagcttgcggcccgaatcggacaaaggcttgaggtgatcgtg
gacgaggtggatggcgagggggcgacctgccgcaccaaggccgatgcgccggagatcgat
ggcaatctcttcatcgatgaggggttcgaggcgctgtctccgggtgacctgctgacggtg
gaggtcgaggaagcgggcgagtacgacctgtggggacgccctgtcttggcgtga
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