Cereibacter azotoformans: LV780_05840
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Entry
LV780_05840 CDS
T07975
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
cazt
Cereibacter azotoformans
Pathway
cazt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cazt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LV780_05840 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cazt03000
]
LV780_05840 (nifA)
Transcription factors [BR:
cazt03000
]
Prokaryotic type
Helix-turn-helix
Other families
LV780_05840 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
GAF
Mg_chelatase
AAA_2
AAA
AAA_16
AAA_22
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UIJ31702
LinkDB
All DBs
Position
1:1169799..1171547
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AA seq
582 aa
AA seq
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MDISAEGSDAAAERGEEYLTLDALCEIAKLLTGASDPIAHMPAVFGVLASFMGLKHGALA
LLQEGAPGESSRNARHINPYVVAATASGGPVSADCRAIPAQAARHVFRNGVSLVSCDIVD
EFGADALPPGLEDKYQALIAVPIRDQANSPFVLGVLCAYRGLRDNGARFLDTDLRVLNMV
AAVLEQSIRFRRLVARDRDRIVQEAREAIRAAAEATSAAPAELPAAELDGVIGSSAAIQR
VIGQIRKVAGTHTPVLLRGESGTGKEVFARALHALSDRRDRPFIKVNCAALSQSLLESEL
FGHEKGSFTGAVQQKKGRFELADGGTLFLDEIGEISLEFQAKLLRILQEGEFERVGGSRT
LKVDVRLVTATNKDLERAVANGTFRADLYFRICVVPIVLPPLRERKEDIGPLAQGLLERF
NKRNGMKKRLHPSAISALAECNFPGNVRELENCIARVAALSPESVIHADDLACHHDHCLS
ADLWRLQTGGASPVGGLAQGPLELPVLGSRPPAPAAPEGAAAPPASPARPAPLDSEAAER
EALIEAMERAGWVQAKAARLRGMTPRQIGYALRKHNIRVEKF
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggacatttccgcggaaggttccgacgcagcggccgagcgcggcgaggagtatctcacc
ctcgacgccctgtgcgagatcgccaagcttctgaccggcgccagcgacccgatcgcccac
atgcccgcggtcttcggcgtgctcgcctctttcatggggctgaagcacggggcgcttgcg
ctgctgcaggaaggggcgccgggcgaatcgtcccgcaacgcgcgccacatcaacccctat
gtcgtggcggccacggccagcggagggcccgtgtccgcggactgccgcgccatcccggcg
caggcggcgcggcatgtctttcgcaacggcgtctcgctcgtgtcctgcgacatcgtcgat
gagttcggggccgacgcccttccgcccggcctcgaggacaagtatcaggcgctgatcgcc
gtgccgatccgggaccaggccaattcgcccttcgtgctgggtgtgctctgcgcctaccgc
ggcctccgggacaatggcgcgcggtttctcgacaccgatcttcgggtgctgaacatggtc
gcggccgtgctcgagcagtcgatccgcttccgcaggctggtggcgcgcgatcgcgaccgg
atcgtgcaggaggcgcgcgaggcgatccgcgcggcggccgaagccacatcggccgcgccc
gccgaactgccggcggccgaactggatggggtgatcggctcctcggccgcgatccagcgg
gtgatcggccagatccgcaaggttgcgggcacccacacgcccgtcctgctgcggggcgag
agcggcaccggcaaggaggtctttgcccgcgccctccacgccctgtcggaccggcgcgac
cggcccttcatcaaggtcaactgcgcggcgctgagccagtcgctgctggaatccgagctg
ttcggccacgagaagggctcgttcaccggggcggtgcagcagaagaagggccggttcgag
ctggccgacggcggcacgctctttctcgacgagatcggcgagatcagcctcgaattccag
gccaagctcctgcgcatcctgcaggagggcgagttcgagcgggtgggcggctcgcgcacg
ctgaaggtggacgtgcggcttgtgaccgccaccaacaaggatctggaacgggcggtggcc
aacggcaccttccgcgccgacctctatttccgcatctgcgtcgtgccgatcgtcctgccg
ccgctgcgcgagcgcaaggaggacatcgggccgctggcccaagggctgctcgagcggttc
aacaagcgcaacggcatgaagaagcggctgcatccctcggcgatctcggcgctggccgag
tgcaactttcccggcaacgtccgcgagctggaaaactgcatcgcccgcgtggccgccctc
tcgcccgagtcggtgatccacgccgacgatctggcctgccaccacgaccactgcctctcg
gccgatctctggcggctgcagacgggcggcgcctcgccggtgggcgggctcgcacagggg
ccgctggaattgccggtgctgggcagccggccgcctgcgcccgcggcgccggaaggggcc
gccgctccgcccgcgtcgcccgcgcggcctgcaccgctcgacagcgaggcggccgagcgc
gaggcgttgatcgaggcgatggagcgcgcgggatgggtgcaggccaaggccgcccggctg
cgcggcatgaccccgcgccagatcggctacgcgctcaggaagcacaacatccgcgtcgag
aagttctga
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