Cereibacter azotoformans: LV780_08100
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Entry
LV780_08100 CDS
T07975
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
cazt
Cereibacter azotoformans
Pathway
cazt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cazt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LV780_08100 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cazt03400
]
LV780_08100 (uvrA)
DNA repair and recombination proteins [BR:
cazt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LV780_08100 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LV780_08100 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
BCA_ABC_TP_C
AAA_25
nSTAND1
DnaJ_CXXCXGXG
nSTAND3
AAA_21
DUF4350
Motif
Other DBs
NCBI-ProteinID:
UIJ29277
LinkDB
All DBs
Position
1:complement(1623425..1626283)
Genome browser
AA seq
952 aa
AA seq
DB search
MAEQKFISVRGAREHNLKGIDIDIPRDQLVVITGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLDMMGKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLWARVGT
PYSPATGLPIAAQQVQDMVDAVMAMPEGTRGYLLAPIVRDRKGEYKKEFLELRKQGFQRV
KVNGTFHELEEPPVLDKKFRHDIDVVVDRIVVREGIETRLADSFRTALNLADGIAIFESA
PAEGEPVRTTFSEKFACPVSGFTIPEIEPRLFSFNAPFGACPDCDGLGVELFFDERLVVP
DQGLTLKQGAIAPWAKSKSPYYTQTVEALARHYGFDPKKKWKDLPDKVREVFLRGSGEEE
ITFRYDEGGRIYQVSRSFEGVIPNMERRYRETDSAWVREEFERYQNNRPCHACGGYRLKP
EALAVKIGGLHIGQVVQMSIKEAFAWVETVPGSLTAQKNEIARAILKEIRERLGFLVNVG
LDYLSMSRAAGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLTTLKNL
RDQGNSVLVVEHDEDAIREADYVFDIGPGAGVHGGQVVAHGTPAEIAADPASLTGQYLSG
TRAIPVSAERRKGNGKTLTVVKASGNNLRDVTVDFPLGRFVCVTGVSGGGKSTLTIETLY
KTAAMRLNGARETPAPCETIKGFEHLDKVIDIDQRPIGRTPRSNPATYTGAFTPIRDWFA
GLPESKARGYQPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCETCKGHRYNRETL
EIRFKGKSIADVLEMTVEDAQEFFQAVPSIREKMDALMRVGLGYIKVGQQATTLSGGEAQ
RVKLSKELSRRATGRTLYILDEPTTGLHFEDVKKLLEVLHELVEQGNTVVVIEHNLDVVK
TADWIIDIGPEGGDGGGTVVAEGTPEEVAKVEASHTGRYLRDMLKPKRLAAE
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacagaagttcatctcggtgcgcggtgcgcgcgagcacaatctcaagggcatc
gacatcgacatcccgcgggatcagctggtggtgatcaccggcctctcgggttcgggcaag
tcgagcctcgccttcgacacgatctacgccgagggccagcgccgctatgtcgagagcctc
tcggcctatgcgcggcagttcctcgacatgatgggcaaaccggacgtggaccatatctcg
ggcctgtcgccggcgatctcgatcgagcagaagaccacgtcgaagaacccgcgctcgacc
gtggggaccgtgaccgagatctacgactacatgcgccttctctgggcgcgggtcggcaca
ccctattcgcccgccaccggcctgcccatcgcggcgcagcaggtgcaggacatggtggat
gcggtgatggcgatgcccgagggcacgcgcggctacctgctcgcgcccatcgtccgggac
cgcaagggcgagtacaagaaggaatttctcgagcttcgcaagcagggcttccagcgggtg
aaggtgaacggcaccttccacgaactggaagagccgccggtgctggacaagaagttccgc
cacgacatcgacgtggtggtggaccggatcgtggtgcgcgaggggatcgagacgcggctg
gccgacagcttccgcaccgcgctgaacctcgccgacgggatcgcgatcttcgagagcgcc
cccgccgagggcgagcccgtgcgcacgaccttttccgagaagttcgcctgcccggtctcg
ggcttcaccatccccgagatcgagccgcggctgttttccttcaacgcgcccttcggcgcc
tgcccggactgcgacgggctgggggtggagctgttcttcgacgagcgcctcgtggtgccc
gatcaggggctgacgctgaagcagggcgccattgcaccctgggccaagtcgaagtcgccc
tattacacccagaccgtcgaggcgctggcgcggcactacggcttcgatccgaagaagaaa
tggaaggacctgcccgacaaggtgcgggaggtcttcctgcgcgggtcgggcgaggaggag
atcaccttccgctatgacgagggcgggcggatctatcaggtcagccgcagcttcgagggc
gtgatccccaacatggagcgacgctaccgcgagaccgactcggcctgggtgcgcgaagag
ttcgagcgctaccagaacaaccgcccctgccatgcctgcggcggctaccggctgaagccc
gaggcgctggcggtgaagatcggcggcctgcacatcgggcaggtggtgcagatgtcgatc
aaggaggccttcgcctgggtcgaaacggtgccgggcagcctgaccgcgcagaagaacgag
atcgcccgcgcaatcctgaaggaaatccgagaacgtcttggtttccttgtcaatgtcggg
ctcgactatctctcgatgagccgggccgcgggcaccctgtcgggcggggaaagccagcgg
atccggctggcgagccagatcggctcggggctgaccggggtgctctatgtgctcgacgaa
ccctcgatcgggctgcaccagcgcgacaacgaccggctgctgaccacgctgaagaacctg
cgcgatcagggcaattcggtgctggtggtggagcatgacgaggatgcgatccgcgaggcg
gattatgtcttcgacatcggccccggcgcaggcgtgcacggtgggcaggtggtggcgcat
ggcacgccggccgagatcgctgccgatccggcgagcctcaccggccagtatctgtccggc
acgcgcgcgatccccgtttcggccgagcggcggaagggcaacggcaagaccctcaccgtg
gtcaaggccagcggcaacaacctgcgcgacgtgacggtggactttccgctgggccggttc
gtctgcgtgacgggcgtctcggggggcgggaaatcgacgctgaccatcgagacgctctac
aagaccgcggcgatgcggctgaacggggcgcgcgagacgccggcgccctgcgagacgatc
aaggggttcgagcatctcgacaaggtgatcgacatcgaccagcggccgatcggacggacg
ccgcgctcgaacccggcgacctataccggcgccttcaccccgatccgcgactggttcgcg
ggcctgcccgagtccaaggcgcgcggctaccagccgggtcggttcagcttcaacgtcaag
ggggggcgctgcgaggcctgtcagggcgacggtgtcatcaagatcgagatgcacttcctg
cccgacgtctatgtgacctgcgagacctgcaagggccaccgctacaaccgcgagacgctg
gaaatccgcttcaagggcaagagtatcgccgacgttcttgagatgacggtcgaggatgcg
caggagttcttccaggcggtgccctcgatccgcgagaagatggacgcgctgatgcgggta
gggctgggctacatcaaggtgggccagcaggcgacgacgctctcgggcggcgaggcgcag
cgggtgaagctgtcgaaggagctgagccgccgggccacgggccgcacgctctacatcctc
gacgagccgacgaccgggctgcatttcgaggatgtgaagaagctgctggaggtgctgcac
gagctggtcgagcagggcaacacggtcgtggtgatcgagcataatctcgacgtggtgaag
accgccgactggatcatcgacatcggtcccgagggcggcgatggcggcgggacggtggtg
gcggaaggtacgccggaggaggtggcgaaggtcgaggcctcgcacaccgggcgctacctg
cgcgacatgctgaagccgaagcggctggcggcggaatag
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